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Heterobasidion irregulare TC 32-1 (Heterobasidion_irregulare_v2.0) ▼

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About Heterobasidion irregulare TC 32-1 (GCA_000320585)

Heterobasidion irregulare is a tree root rotting pathogenic fungus that belongs to the genus Heterobasidion, which includes important pathogens of conifers and other woody plants. It has a wide host and geographic range throughout North America and causes considerable economic damage in pine plantations in the United States. This fungus is also a serious worry in eastern Canada. Heterobasidion irregulare has been introduced to Italy (Lazio) where it has been responsible for extensive tree mortality of stone pine.

(Text from Wikipedia, the free encyclopaedia.)

Taxonomy ID 747525

Data source JGI

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Example region

Genome assembly: Heterobasidion_irregulare_v2.0

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Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

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Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

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Phylogenetic overview of gene families

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Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor