Statistics on protein trees

The protein tree pipeline is described at the following page.

This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:

Overall Summary

Legend
Internal nodes (ancestral taxa) Node types Speciations Duplications Dubious nodes
Leaves (extant species) Gene tree coverage Genes in multi-species trees Genes in single-species trees Orphaned genes
Gene QC Validated genes Short genes Long genes Split genes
----
Drechslerella stenobrocha 248
--------------------------------
-
Arthrobotrys oligospora ATCC 24927
-------
Dactylellina haptotyla CBS 200.50
-------
Tuber melanosporum Mel28
--------------------------------
-
Tuber borchii
-------
Tuber magnatum
-------
Talaromyces atroroseus
-------
Talaromyces islandicus
-------
-
Talaromyces cellulolyticus
-------
----
Talaromyces marneffei ATCC 18224
-------------
Talaromyces stipitatus ATCC 10500
--------------
Rasamsonia emersonii CBS 393.64
----------
Penicillium antarcticum
----------
-
Penicillium camemberti FM 013
-------------
Penicillium brasilianum Pbras_Allpaths-LG
-------------
Aspergillus niger ASM285v2
-------------
Aspergillus clavatus NRRL 1
-------
-------
Aspergillus flavus NRRL3357
----------
-
-
Aspergillus terreus NIH2624
----------------
Aspergillus fumigatus
----------------
Aspergillus oryzae RIB40
----------------
Aspergillus fischeri NRRL 181
----------------
Aspergillus nidulans FGSC A4 ASM1142v1
-----------------
Penicilliopsis zonata CBS 506.65
------------------
Elaphomyces granulatus
------------------
Byssochlamys spectabilis No. 5
----------
-
Coccidioides posadasii str. Silveira
----------
----
Coccidioides immitis H538.4
-------
-------
-
Paracoccidioides lutzii Pb01
----------------
Paracoccidioides brasiliensis Pb18
----------------
Trichophyton benhamiae CBS 112371
----------------
Trichophyton violaceum
----------------
Trichophyton soudanense CBS 452.61
----------------
Trichophyton tonsurans CBS 112818
----------------
-
Trichophyton rubrum CBS 118892
-------------------
Trichophyton mentagrophytes
-------------------
Trichophyton equinum CBS 127.97
-------------
----
Trichophyton interdigitale MR816
-------------------
Trichophyton verrucosum HKI 0517
----------
--------
Microsporum canis CBS 113480
-----------------
Nannizzia gypsea CBS 118893
-------------
Emmonsia crescens UAMH 3008
-------------
-
Emmonsia sp. CAC-2015a
----------------
Blastomyces silveriae
----------------
Blastomyces gilchristii SLH14081
-------------
-
Blastomyces percursus
----------
----
Blastomyces dermatitidis ER-3
-----------------
Helicocarpus griseus UAMH5409
-----------------
Histoplasma capsulatum NAm1
-----------------
Polytolypa hystricis UAMH7299
---------------
-----------
Emergomyces pasteurianus Ep9510
---------------------
Ascosphaera apis ARSEF 7405
---------------------
Uncinocarpus reesii 1704
-------------
-
Capronia coronata CBS 617.96
----------------
Capronia epimyces CBS 606.96
-------------
-
Phialophora americana
----------------
Phialophora attae
----------------
Cladophialophora yegresii CBS 114405
----------------
Cladophialophora bantiana CBS 173.52
-------------
-
Cladophialophora immunda
----------------
Cladophialophora psammophila CBS 110553
----------------
Cladophialophora carrionii
----------------
Fonsecaea multimorphosa CBS 102226
-------------
----
Fonsecaea monophora
----------------
-
Fonsecaea erecta
-------------------
Fonsecaea nubica
-------------------
Fonsecaea pedrosoi CBS 271.37
-------------------
Exophiala xenobiotica
-------------------
Exophiala mesophila
-------------
-------
Exophiala aquamarina CBS 119918
-------------------
-
Exophiala sideris
----
-------------------
Exophiala spinifera
-------------------------
Exophiala dermatitidis NIH/UT8656
-------------
----------
Exophiala oligosperma
-----------------------
Rhinocladiella mackenziei CBS 650.93
------------------------
Cyphellophora europaea CBS 101466
-------------------------
Phaeomoniella chlamydospora
-------------------------
Endocarpon pusillum Z07020
---------------------
-
Oidiodendron maius Zn
----------------
Amorphotheca resinae ATCC 22711
----------------
-
Erysiphe pulchra
-----------------
----
Erysiphe necator
--------------------
Blumeria graminis f. sp. hordei DH14
--------------------
-
Diplocarpon rosae
---------------------
-------
Marssonina brunnea f. sp. 'multigermtubi' MB_m1
----------------------
-
Hyaloscypha variabilis F
-------------------
----
Meliniomyces bicolor E
--------------------------
Glarea lozoyensis ATCC 20868
----------------------
-
Sclerotinia borealis F-4128
-------------------
----
Sclerotinia sclerotiorum 1980 UF-70 ASM14694v1
--------------------------
Botrytis cinerea B05.10
----------------
----
-
Phialocephala scopiformis
----------------------
Phialocephala subalpina
----------------
----
Rhynchosporium agropyri
-------------------
-
Rhynchosporium secalis
----------------------
Rhynchosporium commune
-----------------------
Cadophora sp. DSE1049
-------------------
Rutstroemia sp. NJR-2017a BBW
--------------------
-
Rutstroemia sp. NJR-2017a WRK4
-------------------
Rutstroemia sp. NJR-2017a BVV2
------------------------
Pezoloma ericae
----------------
-
Verticillium dahliae VdLs.17
------------------------
----
Verticillium longisporum vl2.denovo.v1
----------------------
Colletotrichum graminicola M1.001
-------------------
-
Colletotrichum fructicola Nara gc5
-------------------
Colletotrichum higginsianum
-------------------
Colletotrichum orbiculare MAFF 240422
-------------------
-
Lomentospora prolificans
------------------------
----
Scedosporium apiospermum
-------------------
-
Ceratocystis platani
-------------------
Thielaviopsis punctulata
-------------------
Cordyceps confragosa RCEF 1005
-------------------
Beauveria brongniartii RCEF 3172
-------------------
-
Cordyceps fumosorosea ARSEF 2679
-----------------------
----
Cordyceps militaris CM01
-------------------------
Cordyceps sp. RAO-2017
----------
--------------
Beauveria bassiana ASM168263v1
----------------
------------
-
Acremonium chrysogenum ATCC 11550
-------------------------
Ustilaginoidea virens Assembly_for_version_1_of_the_Villosiclava_virens_genome
-------------------------
-
Fusarium fujikuroi EF1
----------------------------
Fusarium verticillioides 7600
----------------------------
Fusarium graminearum CS3005v1
-------------------------
-
-
Fusarium pseudograminearum CS3096
-------------------------------
Fusarium culmorum CS7071
----------------------
--------
[Nectria] haematococca mpVI 77-13-4
--------------------------------
Fusarium oxysporum f. sp. lycopersici 4287 FO2
---------------------------------
Neonectria ditissima
------------------------------
-
Stachybotrys chartarum IBT 40288
-------------------------
Stachybotrys chlorohalonata IBT 40285
-------------------------
Trichoderma asperellum CBS 433.97
-------------------------
Trichoderma parareesei
-------------------------
Trichoderma citrinoviride
-------------------------
Trichoderma guizhouense
-------------------
----
-
Trichoderma harzianum ASM98886v1
-------------------------
Trichoderma atroviride IMI 206040
-------------------------
Trichoderma reesei QM6a
-----------------------
----
Trichoderma longibrachiatum ATCC 18648
-------------------------
Trichoderma virens Gv29-8
-------------------------
Trichoderma gamsii
--------------------------
Escovopsis weberi
----------------------
-
Ophiocordyceps australis OphauG2
-------
----------------
Ophiocordyceps camponoti-rufipedis
----------------------
Tolypocladium capitatum
--------------------
-
-
Tolypocladium paradoxum
----------------------
Tolypocladium ophioglossoides CBS 100239
-----------------------
Drechmeria coniospora
-----------------------
Purpureocillium lilacinum ASM165320v1
-----------------------
Hirsutella minnesotensis 3608
-------------------
Metarhizium acridum CQMa 102
----------
-------
Metarhizium robertsii ARSEF 23
----------------
-
Metarhizium album ARSEF 1941
-------------------
Metarhizium rileyi RCEF 4871
-------------------
Metarhizium majus ARSEF 297
-----------------
-----
Pochonia chlamydosporia 170
-----------------
Torrubiella hemipterigena
-----------------
Moelleriella libera RCEF 2490
-----------------
Claviceps purpurea 20.1
-------------
Gaeumannomyces tritici R3-111a-1
---------------------
-
Pyricularia oryzae 70-15
----------------
Magnaporthiopsis poae ATCC 64411
----------------
Sporothrix schenckii ATCC 58251
----------------
-
Sporothrix insectorum RCEF 264
-----------------
----
Sporothrix brasiliensis 5110
--------------------
Ophiostoma piceae UAMH 11346
--------------------
Grosmannia clavigera kw1407
----------------
-
Neurospora crassa OR74A
----------------
----
Neurospora tetrasperma FGSC 2509
-----------------------
Sordaria macrospora k-hell
----
-----------
-------
-
Chaetomium thermophilum var. thermophilum DSM 1495
----------------
-
----
Chaetomium globosum CBS 148.51
--------------------------
Thermothelomyces thermophilus ATCC 42464
--------------------------
Thielavia terrestris NRRL 8126
---------------------------
Madurella mycetomatis
-------------------
-
Diaporthe ampelina
--------------------
----
Diaporthe helianthi
-----------------------
Coniella lustricola
-----------------------
Valsa mali var. pyri
----------------------------
Phaeoacremonium minimum UCRPA7
----------------------------
Coniochaeta ligniaria NRRL 30616
----------------
-
Hypoxylon sp. CI-4A
-------------------
Daldinia sp. EC12
--------------------
Eutypa lata UCREL1
-------------------------
-----
Pseudomassariella vexata
-----------------
Rosellinia necatrix
-----------------
Pestalotiopsis fici W106-1
-----------------
Microdochium bolleyi
-----------------
-
Rachicladosporium sp. CCFEE 5018
----------------
Rachicladosporium antarcticum
-----------------
-
Baudoinia panamericana UAMH 10762
----------------
Hortaea werneckii EXF-2000
-------------
----
-
Pseudocercospora fijiensis CIRAD86
----------------------
Pseudocercospora musae
-------------------
-
Zymoseptoria brevis
----------------------
Zymoseptoria tritici IPO323
----------------------
Cercospora zeina
----------------
-
-
Cercospora berteroae
-------------------
Cercospora beticola
-------------
--------
Ramularia collo-cygni
-----------------------
Dothistroma septosporum NZE10
-----------------------
Pseudocercospora eumusae
-----------------------
Sphaerulina musiva SO2202
-------------------
Aureobasidium pullulans EXF-150
------------------------
-
Aureobasidium subglaciale EXF-2481
-------------------
Aureobasidium namibiae CBS 147.97
-------------------
Aureobasidium melanogenum CBS 110374
----------------------------
Elsinoe australis
----------------
-
Diplodia seriata UCDDS831v0.1
----------------
----
Diplodia corticola
-----------------------
Neofusicoccum parvum UCRNP2
------------------
-----
--------
Macrophomina phaseolina MS6
------------------------
Acidomyces richmondensis BFW
------------------------
Coniosporium apollinis CBS 100218
----------------
Paraphaeosphaeria sporulosa
------------------------
-
Periconia macrospinosa
-------------------
Stagonospora sp. SRC1lsM3a
-----------------------
-
Epicoccum nigrum
----------------------
Ascochyta rabiei
----------------------
-
Pyrenophora teres f. teres 0-1
-------------------------
Pyrenophora tritici-repentis Pt-1C-BFP
-------------------------
Bipolaris zeicola 26-R-13
-------------------------
Bipolaris victoriae FI3
-------------------
-
-
Bipolaris sorokiniana ND90Pr
-------------
-
-------
Bipolaris oryzae ATCC 44560
----------------------
Bipolaris maydis C5
-----------------------
Exserohilum turcica Et28A
-----------------------
Alternaria alternata
-----------------------
Stemphylium lycopersici
------------------------
Pyrenochaeta sp. DS3sAY3a
------------------------
Leptosphaeria maculans JN3
------------------------
Parastagonospora nodorum SN15
-------------------------
Clohesyomyces aquaticus
-------------------------
Corynespora cassiicola Philippines
--------------------------------------
Xylona heveae TC161
------------------
-
Sugiyamaella lignohabitans
-------------
Wickerhamiella sorbophila
-------------
-
Clavispora lusitaniae ATCC 42720
----
-----------
----
[Candida] auris ASM118947v1
--------------------
Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993
---------------------
-
Nadsonia fulvescens var. elongata DSM 6958
----------------
Kuraishia capsulata CBS 1993
----------------
-
Cyberlindnera jadinii
-------------------
Cyberlindnera fabianii ASM320585v1
-----------------
-
-
Wickerhamomyces ciferrii
-------------------
Wickerhamomyces anomalus NRRL Y-366-8
----------------
-
Komagataella phaffii GS115 GCA_000027005.1
----------------
Komagataella phaffii GS115 ASM174695v1
----------------
-
Ogataea parapolymorpha DL-1
-------------------
Ogataea polymorpha
-----------------
-
-
Pichia membranifaciens NRRL Y-2026
-------------------
Pichia kudriavzevii ASM76445v1
--------------------
Brettanomyces bruxellensis AWRI1499
----------------
Hanseniaspora osmophila
----------------
Hanseniaspora opuntiae
---------------------
-
Hanseniaspora valbyensis NRRL Y-1626
----------------
Hanseniaspora guilliermondii
----------------
Hanseniaspora uvarum DSM 2768
----------------
Candida albicans SC5314 Cand_albi_SC5314_V4
----------------
-
Candida tropicalis MYA-3404
----------------
----
Candida parapsilosis
-----------------------
Lodderomyces elongisporus NRRL YB-4239
--------------------
-
Debaryomyces fabryi
-------------------
Debaryomyces hansenii CBS767
------------------------
Babjeviella inositovora NRRL Y-12698
-------------
---------
Hyphopichia burtonii NRRL Y-1933
------------------------
Suhomyces tanzawaensis NRRL Y-17324
------------------------
Spathaspora passalidarum NRRL Y-27907
------------------------------
------------
Scheffersomyces stipitis CBS 6054
---------------------
Millerozyma farinosa CBS 7064
---------------------
Meyerozyma guilliermondii ATCC 6260
-----------------
-
Kazachstania africana CBS 2517
----------------
Kazachstania naganishii CBS 8797
----------------
-
Eremothecium gossypii ATCC 10895
-------------
----
Eremothecium gossypii FDAG1
--------------------
Eremothecium cymbalariae DBVPG#7215
-----------------
-
Lachancea dasiensis CBS 10888
----------------
Lachancea lanzarotensis
-----------------
-
Tetrapisispora blattae CBS 6284
----------------
Tetrapisispora phaffii CBS 4417
-----------------
-
Naumovozyma dairenensis CBS 421
----------------
Naumovozyma castellii CBS 4309
----------------
Kluyveromyces lactis
-----------------
-
Kluyveromyces marxianus DMKU3-1042
----------
----
Kluyveromyces dobzhanskii CBS 2104
----------------
Zygosaccharomyces rouxii ASM2636v1
-----------------
-
Zygosaccharomyces bailii CLIB 213
----------------
Zygosaccharomyces parabailii
----------------
Saccharomyces arboricola H-6
----------------
Saccharomyces kudriavzevii IFO 1802
-----------------
-
Saccharomyces sp. 'boulardii' ASM129837v2
----------------
Saccharomyces eubayanus
----------------
Saccharomyces cerevisiae S288C
---------------------
Torulaspora delbrueckii
----
------------------
Saccharomycetaceae sp. 'Ashbya aceri'
------------------------
[Candida] glabrata ASM254v2
------------------------
Pachysolen tannophilus NRRL Y-2460
------------------------
Vanderwaltozyma polyspora DSM 70294
-------------------------
Tortispora caseinolytica NRRL Y-17796
-------------------------
Ascoidea rubescens DSM 1968
-------------------------
Yarrowia lipolytica YALIA101
-------------------------
Lipomyces starkeyi NRRL Y-11557
-------------
Pneumocystis jirovecii RU7
-------------
-
Pneumocystis carinii B80
----------------
Pneumocystis murina B123
----------------
Schizosaccharomyces japonicus yFS275
-------------
-
Schizosaccharomyces octosporus yFS286
------------------------------------------
----
Schizosaccharomyces pombe 972h-
-------------
Schizosaccharomyces cryophilus OY26
--------------
Saitoella complicata NRRL Y-17804 Scomplicata_3.0
--------------
Protomyces lactucaedebilis
--------------
Neolecta irregularis DAH-3
----------
-
Puccinia graminis f. sp. tritici 04KEN156/4
-------------
Puccinia graminis f. sp. tritici CRL 75-36-700-3
----------
-----
Puccinia striiformis
-----------------
Puccinia coronata var. avenae f. sp. avenae
----------
--------
Puccinia triticina 1-1 BBBD Race 1
--------------------
Puccinia sorghi
---------------------
Melampsora larici-populina 98AG31
-------------
-
Microbotryum intermedium
------------------
-------
Microbotryum lychnidis-dioicae p1A1 Lamole
-----------------
-
-
Rhodotorula graminis WP1
-------------------
Rhodotorula toruloides ATCC 204091
--------------------
Leucosporidium creatinivorum
-------------------------
Mixia osmundae IAM 14324 Mosmundae_2.0
-------------
-
Ustilago maydis 521
----------------
Ustilago hordei
-------------
-
Moesziomyces antarcticus T-34
-------------
----
Moesziomyces aphidis DSM 70725
--------------------
Anthracocystis flocculosa PF-1
-------------
--------
Pseudozyma hubeiensis SY62
-----------------------
Kalmanozyma brasiliensis GHG001
-----------------------
Sporisorium reilianum SRZ2
------------------------
Testicularia cyperi
----------------
Malassezia vespertilionis
---------------------
-
Malassezia globosa CBS 7966
----------------
Malassezia pachydermatis
----------------
Malassezia sympodialis ATCC 42132 ASM34930v2
----------------
-
Acaromyces ingoldii
------------------
-------
Meira miltonrushii
----------------
-
Jaminaea rosea
-------------------
Pseudomicrostroma glucosiphilum
-------------------
Tilletia controversa
-----------------
-
-
Tilletia caries
-------------------
Tilletia walkeri
-------------------
Tilletia indica
--------------------
Tilletiopsis washingtonensis
--------------------
Tilletiaria anomala UBC 951
--------------------
Ceraceosorus guamensis
-------------------------
Violaceomyces palustris
---------------------
-
Cutaneotrichosporon oleaginosum
-----------------------
-------
Trichosporon asahii var. asahii CBS 8904
-------------
Kwoniella dejecticola CBS 10117
-------------
-
Kwoniella bestiolae CBS 10118
--------------
-------
Kwoniella pini CBS 10737
-------------------
Cryptococcus neoformans var. neoformans JEC21
----------------
-
-
Cryptococcus amylolentus CBS 6039
----------------------
Cryptococcus depauperatus CBS 7841
----------------------
Cryptococcus gattii WM276
-------------
--------
Tsuchiyaea wingfieldii CBS 7118
---------------------
Kockovaella imperatae
---------------------
Tremella mesenterica DSM 1558
---------------------
Naematelia encephala
-------------
-
Calocera cornea HHB12733
----------------------
----
Calocera viscosa TUFC12733
-----------------
Dacryopinax primogenitus
--------------------------
-
Wallemia ichthyophaga EXF-994
-------------
Wallemia mellicola CBS 633.66
---------------------
-
Fibularhizoctonia sp. CBS 109695
----------------
Piloderma croceum F 1598
----------------
-
Pisolithus tinctorius Marx 270
----------------
----
Pisolithus microcarpus 441
-----------------------
Scleroderma citrinum Foug A
--------------------
-
Suillus luteus UH-Slu-Lm8-n1
-------------
----
Rhizopogon vesiculosus
--------------------
-
Coniophora puteana RWD-64-598 SS2
-
----------------
Serpula lacrymans var. lacrymans S7.3
-------------------
-
Paxillus involutus ATCC 200175
----------------
----
Paxillus rubicundulus Ve08.2h10
--------------------
Hydnomerulius pinastri MD-312
--------------------
-
Moniliophthora roreri MCA 2997
-------------------
Moniliophthora perniciosa FA553
--------------------
-
Laccaria amethystina LaAM-08-1
-------
----------
Laccaria bicolor S238N-H82
-----------------
-
Agaricus bisporus var. burnettii JB137-S8
----------------
Leucoagaricus sp. SymC.cos
----------
--------
-
Amanita thiersii Skay4041
-------------------
Amanita muscaria Koide BX008
--------------------
-
Lentinula edodes
-------------------
Gymnopus luxurians FD-317 M1
--------------------
-
Hypsizygus marmoreus
-------------
----
Termitomyces sp. J132
-------------------
Armillaria solidipes
-------------------
-
Armillaria gallica
----------------
----
Armillaria ostoyae
-----------------------
Cylindrobasidium torrendii FP15055 ss-10
--------------------
-
Hypholoma sublateritium FD-334 SS-4
-------------------
Galerina marginata CBS 339.88
------------------------
Pleurotus ostreatus PC15
------------------------
Hebeloma cylindrosporum h7
------------------------
Fistulina hepatica ATCC 64428
------------------------
Schizophyllum commune H4-8
------------------------
Coprinopsis cinerea okayama7#130
-------------------------
Plicaturopsis crispa FD-325 SS-3
-------------------------
Jaapia argillacea MUCL 33604
---------------------
-
Sistotremastrum suecicum HHB10207 ss-3
----------------
Sistotremastrum niveocremeum HHB9708
----------------
-
Fomitiporia mediterranea MF3/22
-----------------
----
Pyrrhoderma noxium
--------------------
Schizopora paradoxa
---------------------
-
Neolentinus lepideus HHB14362 ss-1
----------------
Gloeophyllum trabeum ATCC 11539
-------
------------
-
Serendipita vermifera MAFF 305830
-------------
Serendipita indica DSM 11827
-------------
Rhizoctonia solani AG-1 IA
------------------
-
Botryobasidium botryosum FD-172 SS1
-------------
Tulasnella calospora MUT 4182
-------------
Stereum hirsutum FP-91666 SS1
------------------
-
Peniophora sp. CONT
-------------
Heterobasidion irregulare TC 32-1
-----------------
-
Phanerochaete carnosa HHB-10118-sp
-------
-------
Phlebiopsis gigantea 11061_1 CR5-6
-----------------
-
Daedalea quercina L-15889
----------------
Fomitopsis pinicola FP-58527 SS1
-----------------
-
Laetiporus sulphureus 93-53
----------------
Wolfiporia cocos MD-104 SS10
----------------
Trametes pubescens
----------------
-
Trametes cinnabarina
----------
-------
Trametes versicolor FP-101664 SS1
-------------
----
Trametes coccinea BRFM310
--------------------
Dichomitus squalens LYAD-421 SS1
--------------------
Ganoderma sinense ZZ0214-1
---------------------
Grifola frondosa
---------------------
Fibroporia radiculosa
---------------------
Gelatoporia subvermispora B
---------------------
Phlebia centrifuga
---------------------
Postia placenta Mad-698-R
----------------------
Exidia glandulosa HHB12029
----------------------
Punctularia strigosozonata HHB-11173 SS5
-----------------------
Sphaerobolus stellatus SS14
-----------------------
-
Conidiobolus coronatus NRRL 28638
----------
Basidiobolus meristosporus CBS 931.73
-----------------------
-
Allomyces macrogynus ATCC 38327
----------
Catenaria anguillulae PL171
-----------------------
-
Rozella allomycis CSF55
----------
Paramicrosporidium saccamoebae
--------------
-
Absidia repens
-------------
Hesseltinella vesiculosa
--------------
-
Lichtheimia corymbifera JMRC:FSU:9682
-------------
Lichtheimia ramosa
----------
----
-
Mucor circinelloides f. circinelloides 1006PhL
-------------------