Statistics on protein trees

The protein tree pipeline is described at the following page.

This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:

Overall Summary

Legend
Internal nodes (ancestral taxa) Node types Speciations Duplications Dubious nodes
Leaves (extant species) Gene tree coverage Genes in multi-species trees Genes in single-species trees Orphaned genes
Gene QC Validated genes Short genes Long genes Split genes
----
Tuber borchii
--------------------------------
-
Tuber melanosporum Mel28
-------
Tuber magnatum
-------
Drechslerella stenobrocha 248
--------------------------------
-
Arthrobotrys oligospora ATCC 24927
-------
Dactylellina haptotyla CBS 200.50
---------------
-
Amorphotheca resinae ATCC 22711
----------
Oidiodendron maius Zn
----------
-
Erysiphe necator
-----------
----
Erysiphe pulchra
--------------
Blumeria graminis f. sp. hordei DH14
----------
-
Sclerotinia sclerotiorum 1980 UF-70 ASM14694v1
----------
----
Sclerotinia borealis F-4128
---------------
-----------
Botrytis cinerea B05.10
-----------------
-
Marssonina brunnea f. sp. 'multigermtubi' MB_m1
----------------
Diplocarpon rosae
----------------
-
Meliniomyces bicolor E
-------------
----
Hyaloscypha variabilis F
--------------------
Glarea lozoyensis ATCC 20868
----------------
-
Phialocephala scopiformis
----------
-------
Phialocephala subalpina
----------
----
Rhynchosporium agropyri
-------------
-
Rhynchosporium commune
----------------
Rhynchosporium secalis
-----------------
Cadophora sp. DSE1049
-------------
Rutstroemia sp. NJR-2017a BBW
--------------
-
Rutstroemia sp. NJR-2017a BVV2
-------------
Rutstroemia sp. NJR-2017a WRK4
------------------
Pezoloma ericae
----------
-
Verticillium dahliae VdLs.17
------------------
----
Verticillium longisporum vl2.denovo.v1
----------------
Colletotrichum higginsianum
-------------
-
Colletotrichum graminicola M1.001
-------------
Colletotrichum orbiculare MAFF 240422
-------------
Colletotrichum fructicola Nara gc5
-------------
-
Scedosporium apiospermum
------------------
----
Lomentospora prolificans
-------------
-
Ceratocystis platani
-------------
Thielaviopsis punctulata
---------------------
-
Stachybotrys chlorohalonata IBT 40285
----------------
Stachybotrys chartarum IBT 40288
----------------
-
Fusarium verticillioides 7600
-------------------
Fusarium fujikuroi EF1
-------
-------------
Fusarium graminearum CS3005v1
-------------------
-
-
Fusarium pseudograminearum CS3096
-------------
-------------
Fusarium culmorum CS7071
-------------------
--------
[Nectria] haematococca mpVI 77-13-4
-----------------------------
Fusarium oxysporum f. sp. lycopersici 4287 FO2
------------------------------
Neonectria ditissima
----------------------
Trichoderma longibrachiatum ATCC 18648
----------------------
Trichoderma parareesei
----------------------
Trichoderma reesei QM6a
----------------------
Trichoderma harzianum ASM98886v1
----------------------
-
Trichoderma virens Gv29-8
-------------------------
Trichoderma guizhouense
-------------------------
Trichoderma gamsii
-----------------------
----
Trichoderma atroviride IMI 206040
-------------------------
Trichoderma citrinoviride
-------------------------
Trichoderma asperellum CBS 433.97
--------------------------
Escovopsis weberi
----------------
---------
-
Ustilaginoidea virens Assembly_for_version_1_of_the_Villosiclava_virens_genome
-------------------
Acremonium chrysogenum ATCC 11550
-------------------
Cordyceps sp. RAO-2017
-------------------
Cordyceps fumosorosea ARSEF 2679
-------------------
-
Cordyceps militaris CM01
--------------------
----
Beauveria brongniartii RCEF 3172
----------------------
Cordyceps confragosa RCEF 1005
-----------------------
Beauveria bassiana ASM168263v1
-------------------
-
Ophiocordyceps camponoti-rufipedis
----
-------------------
Ophiocordyceps australis OphauG2
-------------------------
Tolypocladium paradoxum
-----------------------
-
-
Tolypocladium ophioglossoides CBS 100239
-------------------------
Tolypocladium capitatum
--------------------------
Drechmeria coniospora
-------------
-----------
Purpureocillium lilacinum ASM165320v1
-----------------------
Hirsutella minnesotensis 3608
-------------------
Metarhizium acridum CQMa 102
-------------------
Metarhizium album ARSEF 1941
-------------------
-
Metarhizium robertsii ARSEF 23
----------------------
Metarhizium majus ARSEF 297
----------------------
Metarhizium rileyi RCEF 4871
--------------------
-----
Torrubiella hemipterigena
--------------------
Claviceps purpurea 20.1
--------------------
Moelleriella libera RCEF 2490
--------------------
Pochonia chlamydosporia 170
----------------
-
Daldinia sp. EC12
-------------------
Hypoxylon sp. CI-4A
--------------------
Rosellinia necatrix
-------------------------
-----
Pestalotiopsis fici W106-1
--------------------
Pseudomassariella vexata
--------------------
Eutypa lata UCREL1
--------------------
Microdochium bolleyi
----------------
-
Neurospora tetrasperma FGSC 2509
----------------
----
Neurospora crassa OR74A
-----------------------
Sordaria macrospora k-hell
-------------------
-
Chaetomium globosum CBS 148.51
----------------
-
----
Chaetomium thermophilum var. thermophilum DSM 1495
--------------------------
Thielavia terrestris NRRL 8126
--------------------------
Thermothelomyces thermophilus ATCC 42464
---------------------------
Madurella mycetomatis
-------------------
-
Diaporthe helianthi
--------------------
----
Diaporthe ampelina
-----------------------
Valsa mali var. pyri
-----------------------
Coniella lustricola
-----------------
----
Sporothrix brasiliensis 5110
----------------
-
Sporothrix schenckii ATCC 58251
-----------------
----
Sporothrix insectorum RCEF 264
--------------------
Ophiostoma piceae UAMH 11346
--------------------
Grosmannia clavigera kw1407
----------------
Magnaporthiopsis poae ATCC 64411
---------------------
-
Gaeumannomyces tritici R3-111a-1
----------------
Pyricularia oryzae 70-15
-------------------------
Coniochaeta ligniaria NRRL 30616
-------------------------
Phaeoacremonium minimum UCRPA7
-------------
Talaromyces stipitatus ATCC 10500
-------------
Talaromyces cellulolyticus
-------------
-
Talaromyces islandicus
-------------
----
Talaromyces marneffei ATCC 18224
-------------------
Talaromyces atroroseus
--------------------
Rasamsonia emersonii CBS 393.64
----------------
Penicillium antarcticum
----------------
-
Penicillium camemberti FM 013
-------------------
Penicillium brasilianum Pbras_Allpaths-LG
-------------------
Aspergillus clavatus NRRL 1
-------------------
Aspergillus nidulans FGSC A4 ASM1142v1
-------------
-------
Aspergillus fumigatus
----------------
-
-
Aspergillus oryzae RIB40
----------------------
Aspergillus niger ASM285v2
----------------------
Aspergillus terreus NIH2624
----------------------
Aspergillus flavus NRRL3357
----------------------
Aspergillus fischeri NRRL 181
-----------------------
Penicilliopsis zonata CBS 506.65
------------------------
Elaphomyces granulatus
------------------------
Byssochlamys spectabilis No. 5
----------------
-
Coccidioides immitis H538.4
----------------
----
Coccidioides posadasii str. Silveira
-------------
-------
-
Paracoccidioides lutzii Pb01
-------
-------------
Paracoccidioides brasiliensis Pb18
-------------------
Trichophyton violaceum
-------------------
Trichophyton equinum CBS 127.97
-------------------
Trichophyton interdigitale MR816
-------------------
Trichophyton mentagrophytes
-------------------
-
Trichophyton rubrum CBS 118892
----------------------
Trichophyton verrucosum HKI 0517
----------------------
Trichophyton benhamiae CBS 112371
----------------
----
Trichophyton soudanense CBS 452.61
----------------------
Trichophyton tonsurans CBS 112818
-------------
--------
Microsporum canis CBS 113480
--------------------
Nannizzia gypsea CBS 118893
----------------
Emmonsia crescens UAMH 3008
----------------
-
Blastomyces silveriae
-------------------
Emmonsia sp. CAC-2015a
-------------------
Blastomyces percursus
----------------
-
Blastomyces gilchristii SLH14081
-------------
----
Blastomyces dermatitidis ER-3
--------------------
Emergomyces pasteurianus Ep9510
--------------------
Histoplasma capsulatum NAm1
--------------------
Helicocarpus griseus UAMH5409
---------------
-----------
Polytolypa hystricis UAMH7299
---------------------
Ascosphaera apis ARSEF 7405
---------------------
Uncinocarpus reesii 1704
-------------
-
Capronia epimyces CBS 606.96
----------------
Capronia coronata CBS 617.96
-------------
-
Phialophora americana
----------------
Phialophora attae
----------------
Fonsecaea erecta
----------------
Fonsecaea pedrosoi CBS 271.37
----
----------
-
Fonsecaea nubica
-------------------
Fonsecaea monophora
-------------------
Fonsecaea multimorphosa CBS 102226
-------------------
Cladophialophora yegresii CBS 114405
----------------
----
Cladophialophora bantiana CBS 173.52
-------------------
-
Cladophialophora psammophila CBS 110553
----------------------
Cladophialophora carrionii
----------------------
Cladophialophora immunda
----------------------
Exophiala dermatitidis NIH/UT8656
----------------------
Exophiala sideris
----------------
-------
Exophiala aquamarina CBS 119918
----------------------
-
Exophiala mesophila
-------------------------
Exophiala oligosperma
-------------------------
Exophiala spinifera
-------------
----------
Exophiala xenobiotica
-----------------------
Rhinocladiella mackenziei CBS 650.93
------------------------
Cyphellophora europaea CBS 101466
-------------------------
Endocarpon pusillum Z07020
-------------------------
Phaeomoniella chlamydospora
-------------
-
Diplodia corticola
-------------
----
Diplodia seriata UCDDS831v0.1
--------------------
Macrophomina phaseolina MS6
-----------------
--------
Neofusicoccum parvum UCRNP2
------------------------
Acidomyces richmondensis BFW
------------------------
Coniosporium apollinis CBS 100218
--------------------
-
Rachicladosporium sp. CCFEE 5018
-------------------
Rachicladosporium antarcticum
--------------------
-
Baudoinia panamericana UAMH 10762
-------------------
Hortaea werneckii EXF-2000
----------------
----
-
Pseudocercospora fijiensis CIRAD86
-------------------------
Pseudocercospora musae
----------------------
-
Zymoseptoria brevis
-------------------------
Zymoseptoria tritici IPO323
-------------------------
Cercospora berteroae
-------------------
-
-
Cercospora zeina
----------------------
Cercospora beticola
-------------
--------
Pseudocercospora eumusae
-----------------------
Sphaerulina musiva SO2202
------------------
-----------
Ramularia collo-cygni
-----------------------
Dothistroma septosporum NZE10
-------------------
Aureobasidium pullulans EXF-150
------------------------
-
Aureobasidium subglaciale EXF-2481
-------------------
Aureobasidium namibiae CBS 147.97
-------------------
Aureobasidium melanogenum CBS 110374
----------------------------
Elsinoe australis
----------------
Periconia macrospinosa
------------------------
-
Stagonospora sp. SRC1lsM3a
-------------------
Paraphaeosphaeria sporulosa
-----------------------
-
Ascochyta rabiei
----------------------
Epicoccum nigrum
----------------------
-
Pyrenophora tritici-repentis Pt-1C-BFP
-------------------------
Pyrenophora teres f. teres 0-1
-------------------------
Bipolaris maydis C5
-------------------------
Bipolaris victoriae FI3
-------------------
-
-
Bipolaris oryzae ATCC 44560
-------------
-
-------
Bipolaris zeicola 26-R-13
----------------------
Bipolaris sorokiniana ND90Pr
-----------------------
Alternaria alternata
-----------------------
Exserohilum turcica Et28A
-----------------------
Stemphylium lycopersici
------------------------
Leptosphaeria maculans JN3
------------------------
Pyrenochaeta sp. DS3sAY3a
------------------------
Parastagonospora nodorum SN15
-------------------------
Clohesyomyces aquaticus
-------------------------
Corynespora cassiicola Philippines
--------------------------------------
Xylona heveae TC161
----------
-
Clavispora lusitaniae ATCC 42720
--------------
----
[Candida] auris ASM118947v1
-----------------
Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993
----
---------------
-
Sugiyamaella lignohabitans
----------------
Wickerhamiella sorbophila
---------------------
-
Kuraishia capsulata CBS 1993
----------------
Nadsonia fulvescens var. elongata DSM 6958
----------------
-
Ogataea polymorpha
-------------------
Ogataea parapolymorpha DL-1
-----------------
-
-
Pichia kudriavzevii ASM76445v1
-------------------
Pichia membranifaciens NRRL Y-2026
--------------------
Brettanomyces bruxellensis AWRI1499
----------------
-
Komagataella phaffii GS115 ASM174695v1
-------------------
Komagataella phaffii GS115 GCA_000027005.1
-----------------
-
-
Wickerhamomyces ciferrii
-------------------
Wickerhamomyces anomalus NRRL Y-366-8
----------------
-
Cyberlindnera fabianii ASM320585v1
----------------
Cyberlindnera jadinii
----------------
Hanseniaspora valbyensis NRRL Y-1626
----------------
Hanseniaspora osmophila
---------------------
-
Hanseniaspora opuntiae
----------------
Hanseniaspora uvarum DSM 2768
----------------
Hanseniaspora guilliermondii
----------------
Candida tropicalis MYA-3404
----------------
-
Candida parapsilosis
----------------
----
Candida albicans SC5314 Cand_albi_SC5314_V4
-----------------------
Lodderomyces elongisporus NRRL YB-4239
--------------------
-
Debaryomyces hansenii CBS767
-------------------
Debaryomyces fabryi
------------------------
Hyphopichia burtonii NRRL Y-1933
-------------
---------
Spathaspora passalidarum NRRL Y-27907
------------------------
Millerozyma farinosa CBS 7064
------------------------
Scheffersomyces stipitis CBS 6054
------------------------------
------------
Babjeviella inositovora NRRL Y-12698
---------------------
Suhomyces tanzawaensis NRRL Y-17324
---------------------
Meyerozyma guilliermondii ATCC 6260
-----------------
-
Naumovozyma dairenensis CBS 421
----------------
Naumovozyma castellii CBS 4309
-----------------
-
Kazachstania africana CBS 2517
----------------
Kazachstania naganishii CBS 8797
-----------------
-
Lachancea dasiensis CBS 10888
----------------
Lachancea lanzarotensis
-----------------
-
Tetrapisispora blattae CBS 6284
----------------
Tetrapisispora phaffii CBS 4417
----------------
-
Eremothecium gossypii ATCC 10895
-------------
----
Eremothecium gossypii FDAG1
--------------------
Eremothecium cymbalariae DBVPG#7215
----------------
Kluyveromyces marxianus DMKU3-1042
-----------------
-
Kluyveromyces dobzhanskii CBS 2104
----------
----
Kluyveromyces lactis
----------------
Zygosaccharomyces bailii CLIB 213
-----------------
-
Zygosaccharomyces parabailii
----------------
Zygosaccharomyces rouxii ASM2636v1
----------------
Saccharomyces eubayanus
----------------
Saccharomyces sp. 'boulardii' ASM129837v2
-----------------
-
Saccharomyces kudriavzevii IFO 1802
----------------
Saccharomyces cerevisiae S288C
----------------
Saccharomyces arboricola H-6
---------------------
Vanderwaltozyma polyspora DSM 70294
----
------------------
[Candida] glabrata ASM254v2
------------------------
Saccharomycetaceae sp. 'Ashbya aceri'
------------------------
Pachysolen tannophilus NRRL Y-2460
------------------------
Torulaspora delbrueckii
-------------------------
Ascoidea rubescens DSM 1968
-------------------------
Lipomyces starkeyi NRRL Y-11557
-------------------------
Yarrowia lipolytica YALIA101
-------------------------
Tortispora caseinolytica NRRL Y-17796
-------------
Pneumocystis murina B123
-------------
-
Pneumocystis jirovecii RU7
----------------
Pneumocystis carinii B80
----------------
Schizosaccharomyces octosporus yFS286
-------------
-
Schizosaccharomyces cryophilus OY26
------------------------------------------
----
Schizosaccharomyces japonicus yFS275
-------------
Schizosaccharomyces pombe 972h-
--------------
Saitoella complicata NRRL Y-17804 Scomplicata_3.0
--------------
Protomyces lactucaedebilis
--------------
Neolecta irregularis DAH-3
----------
-
Puccinia graminis f. sp. tritici 04KEN156/4
-------------
Puccinia graminis f. sp. tritici CRL 75-36-700-3
----------
-----
Puccinia triticina 1-1 BBBD Race 1
-----------------
Puccinia striiformis
----------
--------
Puccinia coronata var. avenae f. sp. avenae
--------------------
Puccinia sorghi
---------------------
Melampsora larici-populina 98AG31
-------------
-
Rhodotorula graminis WP1
------------------
-------
Rhodotorula toruloides ATCC 204091
-----------------
-
-
Microbotryum intermedium
-------------------
Microbotryum lychnidis-dioicae p1A1 Lamole
--------------------
Leucosporidium creatinivorum
-------------------------
Mixia osmundae IAM 14324 Mosmundae_2.0
-------------
-
Ustilago hordei
----------------
Ustilago maydis 521
-------------
-
Moesziomyces aphidis DSM 70725
-------------
----
Moesziomyces antarcticus T-34
--------------------
Pseudozyma hubeiensis SY62
-------------
--------
Anthracocystis flocculosa PF-1
-----------------------
Kalmanozyma brasiliensis GHG001
-----------------------
Sporisorium reilianum SRZ2
------------------------
Testicularia cyperi
----------------
Malassezia sympodialis ATCC 42132 ASM34930v2
---------------------
-
Malassezia pachydermatis
----------------
Malassezia vespertilionis
----------------
Malassezia globosa CBS 7966
----------------
-
Acaromyces ingoldii
------------------
-------
Meira miltonrushii
----------------
-
Jaminaea rosea
-------------------
Pseudomicrostroma glucosiphilum
-------------------
Tilletia indica
-----------------
-
-
Tilletia walkeri
-------------------
Tilletia caries
-------------------
Tilletia controversa
--------------------
Tilletiopsis washingtonensis
--------------------
Tilletiaria anomala UBC 951
--------------------
Ceraceosorus guamensis
-------------------------
Violaceomyces palustris
---------------------
-
Cutaneotrichosporon oleaginosum
-----------------------
-------
Trichosporon asahii var. asahii CBS 8904
-------------
Kwoniella bestiolae CBS 10118
-------------
-
Kwoniella pini CBS 10737
--------------
-------
Kwoniella dejecticola CBS 10117
-------------------
Cryptococcus gattii WM276
----------------
-
-
Cryptococcus amylolentus CBS 6039
----------------------
Cryptococcus depauperatus CBS 7841
----------------------
Cryptococcus neoformans var. neoformans JEC21
-------------
--------
Tsuchiyaea wingfieldii CBS 7118
---------------------
Tremella mesenterica DSM 1558
---------------------
Kockovaella imperatae
---------------------
Naematelia encephala
-------------
-
Calocera cornea HHB12733
----------------------
----
Calocera viscosa TUFC12733
-----------------
Dacryopinax primogenitus
--------------------------
-
Wallemia ichthyophaga EXF-994
-------------
Wallemia mellicola CBS 633.66
---------------------
-
Fibularhizoctonia sp. CBS 109695
----------------
Piloderma croceum F 1598
----------------
-
Pisolithus tinctorius Marx 270
----------------
----
Pisolithus microcarpus 441
-----------------------
Scleroderma citrinum Foug A
--------------------
-
Suillus luteus UH-Slu-Lm8-n1
-------------
----
Rhizopogon vesiculosus
--------------------
-
Coniophora puteana RWD-64-598 SS2
-
----------------
Serpula lacrymans var. lacrymans S7.3
-------------------
-
Paxillus rubicundulus Ve08.2h10
----------------
----
Paxillus involutus ATCC 200175
--------------------
Hydnomerulius pinastri MD-312
----------------
Armillaria solidipes
----------------
-
Armillaria gallica
----------------
----
Armillaria ostoyae
-------
--------------
Cylindrobasidium torrendii FP15055 ss-10
-----------------
-
Gymnopus luxurians FD-317 M1
----------------
Lentinula edodes
----------
--------
-
Termitomyces sp. J132
-------------------
Hypsizygus marmoreus
--------------------
-
Hypholoma sublateritium FD-334 SS-4
-------------------
Galerina marginata CBS 339.88
--------------------
-
Laccaria bicolor S238N-H82
-------------------
Laccaria amethystina LaAM-08-1
-------------
-----
-
Agaricus bisporus var. burnettii JB137-S8
-------------------
Leucoagaricus sp. SymC.cos
--------------------
-
Moniliophthora roreri MCA 2997
-------------------
Moniliophthora perniciosa FA553
--------------------
-
Amanita muscaria Koide BX008
-------------------
Amanita thiersii Skay4041
------------------------
Hebeloma cylindrosporum h7
------------------------
Coprinopsis cinerea okayama7#130
------------------------
Pleurotus ostreatus PC15
------------------------
Schizophyllum commune H4-8
------------------------
Fistulina hepatica ATCC 64428
-------------------------
Jaapia argillacea MUCL 33604
-------------------------
Plicaturopsis crispa FD-325 SS-3
-------------
-
Fomitiporia mediterranea MF3/22
-----------------
----
Pyrrhoderma noxium
--------------------
Schizopora paradoxa
---------------------
-
Neolentinus lepideus HHB14362 ss-1
----------------
Gloeophyllum trabeum ATCC 11539
---------------------
-
Sistotremastrum niveocremeum HHB9708
----------------
Sistotremastrum suecicum HHB10207 ss-3
-------
------------
-
Serendipita indica DSM 11827
-------------
Serendipita vermifera MAFF 305830
-------------
Tulasnella calospora MUT 4182
------------------
-
Botryobasidium botryosum FD-172 SS1
-------------
Rhizoctonia solani AG-1 IA
-------------
Heterobasidion irregulare TC 32-1
------------------
-
Stereum hirsutum FP-91666 SS1
-------------
Peniophora sp. CONT
-----------------
-
Fomitopsis pinicola FP-58527 SS1
----------------
Daedalea quercina L-15889
-------
--------
-
Phanerochaete carnosa HHB-10118-sp
----------------
Phlebiopsis gigantea 11061_1 CR5-6
-----------------
-
Laetiporus sulphureus 93-53
----------------
Wolfiporia cocos MD-104 SS10
----------------
Trametes cinnabarina
----------------
-
Trametes coccinea BRFM310
----------
-------
Trametes pubescens
-------------
----
Trametes versicolor FP-101664 SS1
--------------------
Dichomitus squalens LYAD-421 SS1
--------------------
Ganoderma sinense ZZ0214-1
---------------------
Grifola frondosa
---------------------
Postia placenta Mad-698-R
---------------------
Gelatoporia subvermispora B
---------------------
Fibroporia radiculosa
---------------------
Phlebia centrifuga
----------------------
Punctularia strigosozonata HHB-11173 SS5
----------------------
Exidia glandulosa HHB12029
-----------------------
Sphaerobolus stellatus SS14
-----------------------
-
Basidiobolus meristosporus CBS 931.73
----------
Conidiobolus coronatus NRRL 28638
-----------------------
-
Paramicrosporidium saccamoebae
----------
Rozella allomycis CSF55
-----------------------
-
Allomyces macrogynus ATCC 38327
----------
Catenaria anguillulae PL171
--------------
-
Absidia repens
-------------
Hesseltinella vesiculosa
--------------
-
Lichtheimia ramosa
-------------
Lichtheimia corymbifera JMRC:FSU:9682
----------
----
-
Rhizopus microsporus Rmicro_CBS_344.29_Allpaths-LG
-------------------