Epicoccum nigrum str. ICMP 19927 (ASM211631v1)

About Epicoccum nigrum str. ICMP 19927 (GCA_002116315)

Epicoccum nigrum is a species of fungus, in the phylum Ascomycota. A plant pathogen and endophyte, it is a widespread fungus which produces coloured pigments that can be used as antifungal agents against other pathogenic fungi. The fluorescent stain, epicocconone is extracted from it.

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Taxonomy ID 105696

Data source The University of Auckland

More information and statistics

Genome assembly: ASM211631v1

More information and statistics

Download DNA sequence (FASTA)

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Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)


This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor