Saccharomyces cerevisiae (R64-1-1)
Description

Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication [Source:SGD;Acc:S000000286]

Location
About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 13 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene YBR082C Show transcript tableHide transcript table

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
UBC4YBR082C_mRNA447148aa
 
Protein coding
P15731 -Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
Markup
  • loading
Show/hide columns
  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........taaatttcactgactatagagtacatacataaacaagcatccaaaaaaac
1YBR082C_mRNA-E1407,169407,1230247
ATGTCTTCTTCTAAACGTATTGCTAAAGAACTAAGTGATCTAGAAAG             
 Intron 1-2407,122407,02895
gtatgtctaaagttatggccacgtt..........caaaatcaacatgctattgaactag
2YBR082C_mRNA-E2407,027406,62820400
AGATCCACCTACTTCATGTTCAGCCGGTCCAGTCGGCGATGATCTATATCACTGGCAAGC
ATCCATCATGGGACCTGCCGATTCCCCATATGCCGGCGGTGTTTTCTTCTTGTCTATCCA
TTTCCCAACCGACTACCCATTCAAGCCACCAAAGATCTCCTTCACAACCAAGATATATCA
TCCAAATATCAATGCCAATGGTAACATCTGTCTGGACATCCTAAAGGATCAATGGTCTCC
AGCTCTAACTCTATCGAAGGTCCTATTATCCATCTGTTCTTTGTTAACAGACGCTAATCC
TGACGATCCTTTAGTACCAGAAATCGCTCATATCTACAAGACTGACAGACCCAAGTACGA
AGCTACAGCCAGAGAATGGACAAAGAAATACGCTGTATAA                    
3' downstream sequence
acagaagtccttactcagctgaaaaagagaagcaagatttatatgggatt..........