Sclerotinia sclerotiorum (ASM14694v1)

About the Sclerotinia sclerotiorum genome

Sclerotinia sclerotiorum is the causal agent of a disease known as white mold. This Ascomycete can infect a wide range of plants in any stage of growth and is widespread in all continents. Some of the hosts are cabbage, common bean, citrus, celery, coriander, melon, squash, soybean, tomato, lettuce, and cucumber. This fungus proliferates under moist conditions which means that crops more susceptible to this pathogen should be planted in well-drained soils.

The genome of the strain 1980 (ATCC18683) of Sclerotinia sclerotiorum was submitted to DDBJ/EMBL/GenBank in 2005 consisting of an 8X whole-genome assembly which encodes about 10,175 protein-coding genes.

Picture credit: Rasbak

Taxonomy ID 665079

Data source Broad Institute

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

About this species