About the Aspergillus fumigatus A1163 genome
Sequencing and first-pass automated annotation of the A. fumigatus A1163 genome was carried out by the JCVI. It consists of 55 scaffolds. This isolate is a derivative of A. fumigatus CEA17 converted to pyrG+ via the ectopic insertion of the A. niger pyrG gene. CEA17 is a uracil auxotroph of A. fumigatus clinical isolate CEA10.
Non coding RNA genes have been annotated using tRNAScan-SE (Lowe, T.M. and Eddy, S.R. 1997), RFAM (Griffiths-Jones et al 2005), and RNAmmer (Lagesen K.,et al 2007); additional analysis tools have also been applied.
Picture credit: Aspergillus/Aspergillosis Website owned by the Fungal Research Trust
Gene annotation
What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.
Update your old Ensembl IDs
Comparative genomics
What can I find? Homologues, gene trees, and whole genome alignments across multiple species.
More about comparative analysis
Download alignments (EMF)
Variation
This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:
