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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
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Transcript: EFQ94391 PTT_07957-1

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Description

hypothetical protein

Location

SuperContig GL533347: 52,795-55,313 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 33 domains and features.

Gene

This transcript is a product of gene PTT_07957 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PTT_07957-1	EFQ94391	2439	812aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3RIS6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gtacgtttgcatcccaggatcggtgagagaggtgtttttgtgactgcaaa
1	EFQ94391-1	55,313	55,253	0	1	61	ATGGGATATGCGGGCAAGGCGACGGCGCCTGCTTGGGACCTGGCCTGGAGCTATGGCGTC G
	Intron 1-2	55,252	55,229			24	gtatgcaatactaacaagtcacag
2	EFQ94391-2	55,228	52,996	1	2	2,233	AGCTTCATGCTCCAGGTCCGACACAGTCGGTGTACCGCGAGGACTGCACCCAGTGCTTCG ACTCAATTGACGACCCCACGGGCCTCGACGTGTGCCTCTACTGCTTCAATGGAGGATGCA CGAGCGATCGCGGTCACGCCCTGCTCCATGTTTCGTCTACAAACCACCCACTTGTACTCA ACATCAAGCGCACACGAAAGAGGGTCAAGCGTGATGAACCACCGCAGAAGATGACCAAGC TTGCCGTTGCAGCTGAAACCGAGTCCGACCGCTACGACACCACCACACAAGTCAAGTGCT ACGAATGCAACATCGATAACGTTGACAAGAGCTCGGGGAAACTTCCTGGAATCGTCGATG CTGTTCTCAAGGCAAACACATTCGCGACGCAGCAGGAGGTCAAGGCATGGGAGCAGGAGC TCACGGCTTGCGAACATACCCTCTGTCTTGAGCAGGACGCCGCACGACAGATTGAGTCTC AGAAGCTGGGTCACTGCTCAGAGTGCGAGCTCAACGAGAATCTGTGGCTTTGCTTGACAT GTGGCAATCTGGGCTGTGGACGTCAGCAGTTTGGTGGCGTCGGTGGCAACTCACATGGAG TAGGACACACCAAGTCGACTGGCCATCCTGTCGCGGTCAAACTCGGCTCCCTCACTGCGG ATGGTACGGCCGATATATACTGCTATGCTTGTGACGAGGAGCGTGTCGACCCAGAGCTAC CGGATCACCTCGCACACTGGGGCATCAACATCAAGGACAGGGTCAAAACAGAGAAGAGTC TCACAGAGATGCAGGTGGAACAAAACTTGCGATGGGACTTTGCCATGGTGACAGAGGACG GCAAGGAGCTACAGCCCTTGTTTGGACCAGACTTGACAGGCTTGAAAAACCTGGGCAACA GTTGTTATCTCAACAGTACTCTACAGGCCCTGTTCTCAATGCCCGAGTTCAAACATCGCT ACTATCTACCTGACCAAGGCCCACCGGACACAGCGCTTCCGGCTGAAGATCTGGAAACCC AGCTACGCAAGATTGCCGATGGTATCATCTCAGGTCGATATTCGAAGCCGGACACGGATG TTATCACAAACGAGTACAGCCCAGAGATCCCACACCAGCGCGGACTTGCGCCTGCCATGT TGAAGCACCTGATCGGACGAGGCCATCCTGAGTTTTCTACAATGCGCCAACAAGATGCGT TCGAACTACTTCTACACATGCTCAAGCTTATCTCACGCTCTCAGCACGTCGCACCTCAAA AAGATCCCGTCGAGGCTTTCCGCTTTGCTATGGAGCAGCGGTTACAATGTGTCGGATGCA AGCGCGTTCGATATAGAACAGACGAACAGGAAAACATTTCCATTCCTGTTCCTATTCGAA GAATACCAAAAGAGTCCCAGATGGACGTCACTGACGGCAACGGTAAGAAGGAAGAAAAGG AAGAATTTGAGCCTGTCTCACTCAAGGAATGCCTGGATATTTTCACAGCCGAGGAGTTGG TTGAACTCACATGCAGCGCTTGTGGCAGCAAAGATGGCTTTACAAAGAGGAGCATGTTCA AGACATTCCCGTCAGTCTTGGCTGTCAATGCCAGGCGATTCGAACTGGTCAATTGGGTAC CCACAAAGCAGGATGTACCTGTCATAGTTGATGATGAGCCGTTCTCGTTCGATGCCTACA AGTCAAAAGGCTTGAGCGAAGGCGAGGAACTACTTCCAGAAGAGATGGATACGGGCGCAG TTGGAGGTTCGTCGAACAAATGGACTCCCAATGAGGTGGCGCTTTCAATGCTCGAGGCCA TGGGATTCCCAAGAGTCAGGTGTGAAAAGGCCCTACATGCGACTGGCAACGAAGATGCCG AGGCAGCATCAATGTGGTTGTTCTCACATATGGAGGACGCAGATATCGATGAACCTGTTG ATTTCAACGCTGGCTCTGGGTCTGGTACAGCCGCTACCTCTGTTATCGATCCCGAGAAGA TTGAGAATCTGGGTGCCATGGGGTTCAATGCTCCTCAGGCACGACAGGCTCTGAAGGAAA CTGGTGGCGATATGGAGCGAGCTGTCGACTGGCTATTCAGCCACCCGGATGCACCTGGTG ACTTCGATGAAGGCGGGGACACGGAGGCTGCTACGGAACAGACTGAAAAGGTGTTGGCTG GTAGTGACCAATTGCCGGCCAACTTTCAACTGCAGTCGATTGTGTGCCACAAGGGCAGTT CTATCCATGCTGG
	Intron 2-3	52,995	52,940			56	gtaagtctagatgactgtcctccca..........gtattagtttgctaactaatcatag
3	EFQ94391-3	52,939	52,795	2	0	145	GCACTACGTTGCGTTTGTGCGCAAACAACTGCCAGATGAGACTTCTGCGTCATGGGTTCT CTTCAATGACGAGAAGGTTGCCAAGGCGGCGGACGTGGAGGAAATGAAGAAGTTTGCCTA TGTGTATTTTTTCAGACGTTTGTAA
	3' downstream sequence						ggcagatggtctaggtcacatgtgacgagctagcatggcaggcgcggagt..........

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