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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FOXG_03818T0

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Description

hypothetical protein similar to cell division control protein 4 [Source:BROAD_F_oxysporum;Acc:FOXG_03818]

Location

Chromosome 4: 2,677,384-2,681,554 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 56 domains and features and is associated with 3 variant alleles.

Gene

This transcript is a product of gene FOXG_03818 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	FOXG_03818T0	4044	1032aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D2XIR1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........ttctcttcaccctcctcgccacactcccttgtacactccccttgcctccc
1	FOXG_03818.1	2,681,554	2,680,640	-	0	915	CAGCCTTGAAGTGCACGCGTGCTCGCTCAGTCAGATAGCCTTACGACCCTTCGTTCTGCC GCCCTGGCTTCCGCGTCTCCATCAGCTTCGATCTACTGCGTTTCGACCGTGTTGTCCCCT TTCCGGTCTCGGGCCTGAGGCTAGCCTCATATCGAAAGCCCTTCGCGTCCGTTGTCGATA TCCGTCCCCCTTGTCGACATATCTCAATAACGGCCATATTGTCACAAAATTTGCCGGCAC TACCAGTCTTCCCATTCGATCAAGTCCAGAGAGTCTGATGCCAGTGGAGTAAGGGCTCGA AAACACCAAACCTTCGAAATCTGGCCGTTAGACAACCTTAAGTTTCGCTTAAGCATCTAC ATGTCCGGAACAAAACCACTTTCTCCTCTTTCGCGTTTCTTGTTCCCCGCGCAGCTTAGC TGTTCCAACAACACATCTCTGATACTACGAGCCTTGGAGCTCCGGAACCAGTCTTGATAC TGATCCCATCAAGACTGCTAAATCGGAACTCGTCCCTAGCCTTGTGCATTTGACGGATGA ACACAAACACACACAAACACCGGCCGCATCATGACACCATCCCCCACAACTAGCCAGGCT CTTGAGCCTCGTCACCCCAAAGCTTCACAAACAGTATCCGTCAACATCTCCGAGGGGACT CAGAACCGCTCCCGCCGCTTCCAGCTCGAGGTGAGCGAGTGTGTCGAGACTAAGACTGTT ACGACCACTACTCGTCTCACGCGAAAGTTCCCTCAGGTCTTCGTTCGTGACCCTGTACCT CTGGAGAACCTAGACACAAAAGAGTATCCTCTCGCTATGAAGCCTACTCCCCCTGAACTG ATCCGGTTCTCGTATAACATGCCAAGTGCTATTGAGACTGACGATGAAGTTGAAGATGAA CCGATGGATCATCAG
	Intron 1-2	2,680,639	2,680,564			76	gttagttttcacgttatgctcccca..........acagaccatgctgacatatacacag
2	FOXG_03818.2	2,680,563	2,677,918	0	0	2,646	TTATCTTGCAATTCTCGTTCTACCCCCACTCAACTCAAAACTGAGTCCCCTCAAGAGTCC AACCTCGGCCGGGTACCCAAGCATCGATCACAATCTCCCTCAGAAGGATATCCTCGCCGT TCCCGCGCTTCTAGAGCCACCACTATAGATTCCCCCGAATCTTCAGCACCCACTTCGAAC CCTCGACGACCTGGTCGCTCCATTCCCCTGAACGCCGTATCGGATAAACTTCGTCGCTCC ATTGCCCATAATTCGAATCGACAAGGAGAGAGGTCATCCAGACCTTCTGGGGGCTTCCTT GCTACTCCCGATACTTCAGAAGTCGTTGGTGCGGCTGAGAGATCAGCTCACCGACGCTCG TCACACCATGAACGAAATCAATCACCCGAAGCATCTTCCTCGGCTGTCAGCCCTCATTAC GAAGCCACCAGCCCTGTAGAGAGTGATTCACATACTGTCTTTAGCAGCAATGTCGCTACT CCACCAATTACTGATGCTGACGCAGAACCGTTCGCTGATGCTGATGGATCTTTACAACAA CCTATCCGTCCCTTTAATCCCCGTCCCAGTATCGATGTCGTTGCCGCCCAAGATGCTAGT CTTCCTAGTCCCAGACTGTCGCCTACCTTGGCAGCCGCTCAGCTACATACTGCCGATGAC GATGATGAGACACAGCCTAGCTTCCAGTCCTCGAACCTAGATCCCTCAAGATGGGTTGAT GAATCACAGCCAATGGAAGATGATTCCTTGACTGCTCTCGTTCGTACTGGCCATTCCCAG GATGATTACGCCCTTGCTCGCACTGATGGTGCCCCTCAAGGTGTCGATTCGCTACAGGTC GTCGACACACAGACACTGCTCGAGGCATTCGACTCCATGAAAACCGAAATGAAGACATTC ATGATGTATCAGTTTCTTCGCCGTTGTCCTCGTCCGACCCTCCGCGTTGTGGCCAACGCT GTGAACCCAGCACTCAAATGTGATTTCTTACGACAGTTACCCCTGGAACTTGGATATTCT GTTTTGTCTCATCTCGATCACCGAGATCTTTGTCGAGCTGCACAAGTCTCAAAGCACTGG CGAAACATTGTTGATCGTAATGAAACAGGGTGGAAGGAACTGTTTGACAGAGATGGCTAC ACCCTCCCACCTGGGGAACTTCAGAAGGCCATTATCCAAGGTTGGGGCTGGCAAGATCCT GTTGGCGCAAATGGATACGAAAAGGATTTGAGCATGCGAACCCGGTTGACTTCAACTGAG CACGAGCTTACCCGGACTCTTCGACAAGAGACAGCCTCCAAGTCTCGGGCTTCCAAGCGC AAGCGAGCGATCAACACTTATTCGGCCGAGCGATCTAAGCGACGTGCCAGTGCGCAGGAA GCCGTGGCTCGTGAAGAGAACAAGTCGCAGCCCGAGGCCCGCCAACACAAGTCGGAAGGA CCACTGTCTGCTGCAAATGCTGCCGCTACAGCTGTCCCTGATCCCCAGCTTGGACTGCCC AGTCTTCGCGAGCTTCATCTATACAAGTCACTTTACCGCCGTCATCACATGATCCGTAAG AGTTGGACCAGCGGCGAGGTTAAACCTGGCCACGTCGCGTTCGCAGCTCATCCTCGTCAC GTTATTACGTGTCTCCAGTTTGACGAAGACAAGATCATTACAGGTAGCGACGATACACTC ATCCACATCTACGATACTAAGACGGGCAAGCTCCGCAAGAAGCTTGAAGGTCATGAAGGT GGTGTCTGGGCACTACAGTATGAAGGCAACATGCTGGTGTCTGGCTCTACTGACAGATCT GTTCGCGTCTGGGATATCGAACGTGGCCTTTGCCAGCAGGTATTCTACGGGCACACTAGT ACTGTCCGTTGCCTGCAAATCCTGATGCCCACCGAGACTGGGAGAGATTCCAGTGGACAG GCCATCATGCAGCCCGAGAAGCCTCTCATCATCACCGGCTCCAGGGACAGTCAGCTCAGG GTCTGGCGACTTCCTGAGGTTGGGTCCCGTCGATATATCCAGACTGGCCCCCCAGCTCAT GAGTCCGACTGCCCTTACTTCATTCGAGTGTTGGCCGGACACACGCATTCTGTTCGCGCC ATTTCCGCTCATGGTGACACCCTCGTCAGTGGCTCTTATGACAGCACTGTCCGGGTTTGG CGTATCAGCACCGGTGAGGCTCTCCATGTGCTCCATGGTCACTCTCAAAAGGTTTACTCT GTCGTCCTCGACCATGAACGCAATCGTTGTATCTCGGGCTCGATGGATTCGCTGGTCAAG ATCTGGGATCTTGCAACTGGCGCGTGTCTGTACACTCTCGAGGGACACAGTTTGCTCGTC GGTTTGTTAGACCTTCGCGATGAGCGATTGGTGTCGGCGGCGGCCGACTCGACTCTTCGT ATCTGGGATCCAGAAAATGGCAAATGCCGCAATACTCTCATGGCGCATACTGGGGCTATT ACCTGTTTCCAGCACGATGGCCGGAAAGTTATTAGTGGCAGTGAGAAGACGGTCAAGATG TGGGATGTCCGAACTGGCGAATGCGTTCAGGACTTGTTGAGCGATCTCAGTGGTGTTTGG CAAGTCAAATTTGACGAACGACGATGTGTGGCTGCTGTCCAGCGTGATTCACTCACCTAC GTCGAG
	Intron 2-3	2,677,917	2,677,867			51	gtatgttacagcgcagataacttaa..........agtaacaagtactaacatgatccag
3	FOXG_03818.3	2,677,866	2,677,384	0	-	483	ATTCTTGACTTTGGAGCTGTCCGAGACGGCAAGCCACCAGAGGAACTTGGAAAGCGTATC CTTCTCAACGAACCTGAGGTTCGCGCAATGATTGAGGAAGAAGCTTAATACATCACATTA CGGATGAATGGATGACGGACCACGCATATAGGCAATATGTTTTTTTTTCGCAACGGGTTG TTCTACACATGGGCAACTGATGAAACAACGGCGTTGAGGTATCGTACATTTACGCATAAA CAACACACATAGTTACGAAGTACCAGCATGAACCGGGCGGGCAGGCGTTTGTTGCTATTG GGATGGATGCATGCATATACCTATTGTTTTTTATTCAGAAGTTGATACATGTCATGGAGG CTCAGGGCAGACAGAGGTTCAACCTTTTGTCTCGCGATGAGCTGAAAGATATATGAACAA AAGCCATGCTTAGGGGGCTCAGCATGCAATTATAGGAGTCAATGAATTTGGTACACTTTA TCG
	3' downstream sequence						agtctcagtctgtgatgtttgtgaacgttggctcatagattccgtggtgc..........

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