Rhizophagus irregularis DAOM 197198w str. DAOM197198w (Rir)

Rhizophagus irregularis DAOM 197198w str. DAOM197198w Assembly and Gene Annotation

About Rhizophagus irregularis DAOM 197198w str. DAOM197198w (GCA_000597685)

Rhizophagus irregularis (previously known as Glomus intraradices) is an arbuscular mycorrhizal fungus used as a soil inoculant in agriculture and horticulture. In addition, it is one of the best mycorrhizal varieties of fungi available to mycoforestry, but as it does not produce fruiting bodies it
"has virtually no market value as an edible or medicinal mushroom
"

Rhizophagus irregularis is also commonly used in scientific studies of the effects of arbuscular mycorrhizal fungi on plant and soil improvement.

Recent molecular analysis of Ribosomal DNA suggested that Glomus intraradices is not in fact in the genus Glomus at all, and should be renamed Rhizophagus intraradices.

(Text and image from Wikipedia, the free encyclopaedia.)

Assembly

The assembly presented is the Rir assembly submitted to INSDC with the assembly accession GCA_000597685.1.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000597685.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyRir, INSDC Assembly GCA_000597685.1,
Database version111.1
Golden Path Length140,695,967
Genebuild byLaboratory of Computational Molecular Biology, College of Life Sciences, Beijing Normal University
Genebuild methodImport
Data sourceLaboratory of Computational Molecular Biology, College of Life Sciences, Beijing Normal University

Gene counts

Coding genes27,300
Non coding genes256
Small non coding genes245
Long non coding genes11
Gene transcripts30,167