We need your help! Has Ensembl saved you time or effort? Please take 15 minutes to fill in a survey and help EMBL-EBI make the case for why open data resources are critical to life science research.
https://www.surveymonkey.com/r/QGFMBH8?channel=[webpage]

Ensembl Genomes HomeEnsembl Fungi HomeEnsembl Fungi Home ▼
More ▼
Search »
Lentinula edodes str. G408PP-4 (Lened_assembly01) ▼

Favourite species

All species

Search

About Lentinula edodes str. G408PP-4 (GCA_002003045)

The shiitake (; Lentinula edodes) is an edible mushroom native to East Asia, which is cultivated and consumed in many Asian countries. It is considered a medicinal mushroom in some forms of traditional medicine.

(Text and image from Wikipedia, the free encyclopaedia.)

Taxonomy ID 5353

Data source Iwate Biotechnology Research Center

More information and statistics

Example region

Genome assembly: Lened_assembly01

More information and statistics

Download DNA sequence (FASTA)

Display your data in Ensembl Fungi

Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor