Nakaseomyces glabratus Assembly and Gene Annotation
About Candida glabrata (GCA_001466525)
Candida glabrata is a haploid yeast of the genus Candida, previously known as Torulopsis glabrata. This species of yeast is non-dimorphic and no mating activity has been observed. Until recently, C. glabrata was thought to be a primarily non-pathogenic organism. However, with the ever increasing population of immunocompromised individuals, trends have shown C. glabrata to be a highly opportunistic pathogen of the urogenital tract, and of the bloodstream (Candidemia). It is especially prevalent in HIV positive people, and the elderly.
There are two widely cited potential virulence factors that contribute
to the pathogenicity of C. glabrata. The first is a series of adhesins
coded by the EPA (epithelial adhesin) genes. These genes, located in the
subtelomeric region, can respond to environmental cues that allow them
to be expressed en masse so the organism can adhere to biotic and
abiotic surfaces in microbial mats. This is also the suspected mechanism
by which C. glabrata forms microbial
"biofilms
" on urinary
catheters, and less commonly in-dwelling IV catheters. It also causes
problems with dental devices, such as dentures.
(Text and image from Wikipedia, the free encyclopaedia.)
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_001466525.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.
Statistics
Summary
| Assembly | ASM146652v1, INSDC Assembly GCA_001466525.1, |
| Database version | 116.1 |
| Golden Path Length | 12,622,465 |
| Genebuild by | Oslo University Hospital, Rikshopitalet |
| Genebuild method | Import |
| Data source | Oslo University Hospital, Rikshopitalet |
Gene counts
| Coding genes | 5,214 |
| Gene transcripts | 5,214 |


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