Ashbya gossypii (ASM9102v1)

Ashbya gossypii Assembly and Gene Annotation

About Ashbya gossypii ATCC 10895

Eremothecium gossypii (also known as Ashbya gossypii) is a filamentous fungus or mold closely related to yeast, but growing exclusively in a filamentous way. It was originally isolated from cotton as a pathogen causing stigmatomycosis by Ashby and Nowell in 1926. This disease affects the development of hair cells in cotton bolls and can be transmitted to citrus fruits, which thereupon dry out and collapse (dry rot disease). In the first part of the 20th century, E. gossypii and two other fungi causing stigmatomycosis (Eremothecium coryli, Aureobasidium pullulans) made it virtually impossible to grow cotton in certain regions of the subtropics, causing severe economical losses. Control of the spore-transmitting insects - cotton stainer (Dysdercus suturellus) and Antestiopsis (antestia bugs) - permitted full eradication of infections. E. gossypii was recognized as a natural overproducer of riboflavin (vitamin B2), which protects its spores against ultraviolet light. This made it an interesting organism for industries, where genetically modified strains are still used to produce this vitamin.

Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 284811

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Annotation

Annotation of Ashbya gossypii was imported from the European Nucleotide Archive. Non coding RNA genes have been annotated using tRNAScan-SE (Lowe, T.M. and Eddy, S.R. 1997), RFAM (Griffiths-Jones et al 2005), and RNAmmer (Lagesen K.,et al 2007); additional analysis tools have also been applied.

References

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome.
    Dietrich FS, Voegeli S, Brachat S, Lerch A, Gates K, Steiner S, Mohr C, Phlmann R, Luedi P, Choi S et al. 2004. Science. 304:304-307.

Other Data

Probe mapping data has been loaded for the experiment A-AFFY-105.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyASM9102v1 (Ashbya gossypii ATCC 10895 assembly from BioProject 13834), INSDC Assembly GCA_000091025.3, Oct 2010
Database version115.1
Golden Path Length9,119,312
Genebuild byAGD
Genebuild methodImport
Data sourceAshbya Genome Database

Gene counts

Coding genes4,776
Non coding genes725
Small non coding genes725
Pseudogenes19
Gene transcripts5,520