
Ashbya gossypii Assembly and Gene Annotation
About Ashbya gossypii ATCC 10895
Eremothecium gossypii (also known as Ashbya gossypii) is a filamentous fungus or mold closely related to yeast, but growing exclusively in a filamentous way. It was originally isolated from cotton as a pathogen causing stigmatomycosis by Ashby and Nowell in 1926. This disease affects the development of hair cells in cotton bolls and can be transmitted to citrus fruits, which thereupon dry out and collapse (dry rot disease). In the first part of the 20th century, E. gossypii and two other fungi causing stigmatomycosis (Eremothecium coryli, Aureobasidium pullulans) made it virtually impossible to grow cotton in certain regions of the subtropics, causing severe economical losses. Control of the spore-transmitting insects - cotton stainer (Dysdercus suturellus) and Antestiopsis (antestia bugs) - permitted full eradication of infections. E. gossypii was recognized as a natural overproducer of riboflavin (vitamin B2), which protects its spores against ultraviolet light. This made it an interesting organism for industries, where genetically modified strains are still used to produce this vitamin.
Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 284811
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Annotation
Annotation of Ashbya gossypii was imported from the European Nucleotide Archive. Non coding RNA genes have been annotated using tRNAScan-SE (Lowe, T.M. and Eddy, S.R. 1997), RFAM (Griffiths-Jones et al 2005), and RNAmmer (Lagesen K.,et al 2007); additional analysis tools have also been applied.
References
- The Ashbya gossypii genome as a tool for mapping the ancient
Saccharomyces cerevisiae
genome.
Dietrich FS, Voegeli S, Brachat S, Lerch A, Gates K, Steiner S, Mohr C, Phlmann R, Luedi P, Choi S et al. 2004. Science. 304:304-307.
Other Data
Probe mapping data has been loaded for the experiment A-AFFY-105.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | ASM9102v1 (Ashbya gossypii ATCC 10895 assembly from BioProject 13834), INSDC Assembly GCA_000091025.3, Oct 2010 |
Database version | 115.1 |
Golden Path Length | 9,119,312 |
Genebuild by | AGD |
Genebuild method | Import |
Data source | Ashbya Genome Database |
Gene counts
Coding genes | 4,776 |
Non coding genes | 725 |
Small non coding genes | 725 |
Pseudogenes | 19 |
Gene transcripts | 5,520 |