Trichoderma virens (ASM17099v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID History.
hypothetical protein
SuperContig 4: 1,656,385-1,660,975 forward strand.
This transcript has 5 exons and is annotated with 55 domains and features.
This transcript is a product of gene TRIVIDRAFT_208590 Show transcript tableHide transcript table
.
| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........gccaaccagctattcgacacacttcctcttcctagtgcctgcgtgcgaca
| ||||||
| 1 | EHK24721-1 | 1,656,385 | 1,656,412 | 0 | 1 | 28 |
ATGTCGGCGGCCGCTGGCGTTGATCCGA
|
| Intron 1-2 | 1,656,413 | 1,656,489 | 77 |
gtatggcttccacatttctcacagc..........gactggctgttcttctcttctttag
| |||
| 2 | EHK24721-2 | 1,656,490 | 1,656,641 | 1 | 0 | 152 |
GCGCGCCGAACCTCAATCTCTCACCCGAAGAGAAGCGCATCTATGGCCAGCTCTTCCGCC AGGCCGATACCGATGGCGTGGGCGTTGTCACCGGCGAGATAGCCGTCAAGTTTTTCGAGA AGACGCGGCTGGATTCACGCATCCTGGGAGAG |
| Intron 2-3 | 1,656,642 | 1,656,782 | 141 |
gtttgtcgctcctttatactctcca..........cgctgtgcttttatcacgactgcag
| |||
| 3 | EHK24721-3 | 1,656,783 | 1,659,736 | 0 | 2 | 2,954 |
ATATGGCAGATTGCCGACAAGGAGAACCGTGGCTTCCTCACTCCCGCTGGCTTTGGCATC GTACTTCGCCTCATTGGCCATGCCCAGGCCGGACGAGAGCCAACGCCCGAGCTTGCTCTT CAGCAAGGGCCCATCCCCCGCTTCGAAGGCCTTTGGCCAGCTACCGCCACCTCACCGTCG CAGGCGCAGACGCCCATCCAGCCTCAGGTCTCTGGCGGCGTTCGCATTCCTCCCTTGACT CCTGACAAGGTTTCACAGTATGCCGCCTTGTTTGAGCGTCAAAACCTACAGGTGAACATG CTGCCAGGCGATCAGGCCAGATCCATCTTCGACAAGTCCGGCCTGCCCAACGAGACGCTT GGTAGAATATGGGGACTGGCTGATACCGAACAACGGGGTGCTCTCGCTCTTCCCGAATTC ATCATCGCCATGCACCTGCTTACGTCCATGAAGACGGGCGCTCTGCGCGCATTGCCCAAC GTTCTGCCCGCTGGCTTGTATGAGGCCGCGACGCGCAGCTCAGCGACCGCTCCCAGACAG TCGCCAAGCAATACTGGTAGCATCACTGCCATCCCTCGGCAGCTGAGTGGCTCGACTCAG CAGCAGAGGACAGGAAGCCCGCTCAATCGCCCGCCGATAGTTGCTGCCCAGGTTACTGGA CCCCCTGCGGCGAATAACGACTGGGCCATTACTCCGGCCGACAAGGCAAGATTTGACCAG ATTTACCTCGATTTCGATAAGACAAACAAGGGCTTCATCACCGGCGAGGAAGCCGTGCCC TTCCTCAGTCAGTCTAATCTCCCCGAAGACACGCTCGCCCAGATTTGGGACCTAGCGGAC TTTGGCTCTCAGGGACGGTTGTCGCGCGATGGGTTTGCCGTTGCCATGTACTTGATTCGC CAGCAGCGCAGCAACCGGGCAACTCCCTTGCCCAGCACTCTGCCCACAAATCTGATCCCG CCGCATTTGCGAACCCAGAGCCGTCCTGCTACCGCAGTTTCATCGGCCTTTGATCCCACG CCGGCCCTCACCCAAGCCGCTCCGCCCCCGGTAGCTGCCTCTGCCCCGCCAGCGCCCAAA TCTGCTCTCGAGGACTTGTTTGGCCTTGACTCTTCCACTCCCAGCCCGGCGCCTTCGGCC CCGGCGCAGACTACAATGTCCACGGGAGGCTCAAATGCTGATCCATTCGCCGGTGGCATC AGCGTGCTCCACACAGCATCTTCCCCCGGCAAACCGTCATCCCCCGTCGGTGTGACGTTT AGGCCGTTCGTGCCATCCTCCTCCTTTGGCCGTGGCTTGGCTGGACACCCTGGAGCTGAG GCGGCGCGGCCGCACACGGCTTCAGAGGACCTCCTTGGCGATACTGATCCCGAGGCAAAC AAGAACATCTCTGATGAGACAACTGAGCTTGCCAATCTGTCAAATCAGATCGGCTCTCTG ACGAAGCAGACGCAGGAGGTTCAAACTAAGAGGGCCACGACTCAGCACGAGCTGAGCCAG ACTAACTCCCAGAAGCAAAACTTTGAACAGCGATTGGCACAGCTGCGACAGCAATATGAA AAGGAGGCCCAAGATACACATGCTCTTGAGGAGAAGCTTAGAAACTCGCGGGCCGATACT AAGAAGTTGCAGGGAGAATGCATGACTCTGGAAGGACAGCTTCGAGACATTCAGGGCCAG CACCAGCAGGTCCTGGCTGCCCTCCAGGCTGACCAGCAGGAGAACGCCAGCCTGAGAGAG CGCATTCGTCAAGCGAATGCTGATATCGCCGAGCTCAAGCCTCAGGTTGAAAAGCTCAAG CTGGACGCCAGGCAGCAGAAGGGTCTCGTTGCAATTAACAAGAAGCAGTTATCCACCACT GAGGGAGAGCGCGACAAGCTCAAGGCAGAGGCCGAATCTCTGGCCAAGAGCGCCGAAGAC ATCTCTCGCCAGATAGAGACGGGCTCGCCCGTGTCTACCTCGGCGCAGATGGCTAGCCCT GCGCTTTCGACCTCTAGCGGTAACAACCCCTTCTTCAAACGGTCCGCCAGCACAGACATC ATGGGCGTGTTTGGGCCGCCACCCCCGAACAGGGCCTTTTCCGACAGGTCCTTTGACGAT TTGTTTGGCCCCGCCGGCCCCGTCAGCTCCAGCGGCACTCCCCCGCCAGTTGCAGCATTC AAACAACAAAACACGGGGCAGTCATCAGTTAGTGTTGGATCCTTTTCTAACAACTCAGGG CCGACTCCCAATGTCAGCCGCGTCCCAACGCTGAGTGCTGAACCTCCTGCGCCGCCAGAG TCCAGACAATTAAGCTCGAGCTTCTTGCCGTTCCCCGAGCCTAACGAGTCACTGTCTTCG TCGCGACAAGTGTCTCCCCCTACCTCCTCACGCGCCGAAGGCTCGGCGTCCGGCTCATTC CCCTTCACCGGCGGTGTGACACCAGGCGCCGCAGAGGCCAGGACTCCTGCGGCTGCGGCT TCCAGCGAAGAAGAGGAGAAACATGACAGCGCCAGCGCGACCCCCGTCCCGGCCGCTCAA GGCGATAGCTCGCAGAAGCCCGCGGAGGGAGAAGTCCAAGATCGATCCGGCTCTTTTGAC ACTACTGACCATGCTAAGGCCAAGGCAGACTTTGACAATGCATTTGCCGCCTTCACCTCA GCCAAAACCCCCAGCAGCGGCGCAGACAAGGGAGCTGCTGCTGTAAAGCCCCATAACGCC TTCGACAACGCCTTCGACACAGAGTTCCCGCCCATTTCGGAGCTTGAGCGGGACGTGTCT GAGTCTGACAGTGAGAGGGGAGGCTTTGACGACGATTTCGCCCCTGCGTCGCCAGAGAAC AAGGCCAAGGAGAAGCAGGTTGCTTTGGAGCCAACTCCGGAGTCCCACAGACCAGCTGCC GAAGCCTCCGACTTGAACGCCCCTTTGTCGCCATCTCAGGATACAACAGCTACCCATGAA CCCGAAACCAAAAG |
| Intron 3-4 | 1,659,737 | 1,659,836 | 100 |
gtaaatgcgcggaaatgattaatat..........tcattcactaacgctaattccacag
| |||
| 4 | EHK24721-4 | 1,659,837 | 1,660,467 | 2 | 0 | 631 |
CGCGGAATTACCTTCCTCTCCCGCCACGATAACCAACAACCATGCGATCACCTCTCCGAC CTCCAACACTGATGATATCTTTGGTTCCAGCACAATACCAGCACCTAGCCATCACAACCC ACCTCCAGCTACCAAGGGCGCCTTCGATGACCTCGACGATGATTTCGAAGGCCTAGAAGA TGCCAAGGAAGGCTCCGCGGATGACGACTTTGCCAACATTTCTCGGTCTGGGCTGGACGA CTATAACCCCATGTTTGATAGCAGCCCCCCGGCTAGCCAGGCCAAGAGCGAGTCTACAGC ATTTGGCAACGAGAGCAGCTTTGACTTCATCTCATCCAACTCAGCCACCAGCGCCCCTGG CCAGTCTAGCAGCGGACAGCAGTCTCACGACTGGGACGCCATCTTTTCTACACTGGATTC GCCCACCGTCACCCCAGCACAGCCTGTACAAAGCAACAACACTGGCCCTGCGAAAGAAGA GACGGCCGAGTCCCGCCCCCCGGCTCCCGGACGTGCTCTCACGGAAGCGGGAGAGCATGA TGACCCAATCCTTAAGAACCTGACCAGCATGGGTTACTCGCGTCCTGACGCTCTTGCTGC ACTCGAAAAGTATGACTACAACCTGGAAAGA |
| Intron 4-5 | 1,660,468 | 1,660,539 | 72 |
gtaagtttttcttttctgaaggaga..........caataactgacttgtcttttcttag
| |||
| 5 | EHK24721-5 | 1,660,540 | 1,660,975 | 0 | 1 | 436 |
GCCGCCAACTTTCTTGCCAGCCAGTCTTAAAGGTGAATCGAGAGCGGGGGAGATAACCCG TCCTTAATATCGGGCTTTGGCTTTCCATCGTGGTGTAGGAGAAAAGCATATTACCGCATA GCAAACACCGTTCGTTCATTTATCGTAAGGGGGCTGGGGCGGGGACTTTGAATTTCTTTG ACATTGTTTTTTATTTTCTTCAATAAGGGGCCAGGTTTTTTTTTTTTGTACAAGGCCGTC GCAGTCGCGCTCTACTAGTACGTCTCGGATCTTGGGAAGGGGTTGGAGGGGAGGAAACAC CAACATAAATCGATCGCTAGTCCTGTTCTATTACAATTTTCCTTTTCCTTTTCCTTTTCG TTTTCCATTTGTTCTATTTTCTTCTTGAGCTGTATTGAAGGATATGGGAGGGAGATTGTC GTTCAGCAATTACAGG |
| 3' downstream sequence |
gatacgacacatgcattcatcctttcttaaggggatatgtcgtggtgctc..........
|
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Ensembl Fungi release 60 - October 2024 © EMBL-EBI EMBL-EBI
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