Statistics on protein trees

The protein tree pipeline is described at the following page.

This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:

Overall Summary

Legend
Internal nodes (ancestral taxa) Node types Speciations Duplications Dubious nodes
Leaves (extant species) Gene tree coverage Genes in multi-species trees Genes in single-species trees Orphaned genes
Gene QC Validated genes Short genes Long genes Split genes
----
Arthrobotrys oligospora ATCC 24927
--------------------------------
-
Drechslerella stenobrocha 248
-------
Dactylellina haptotyla CBS 200.50
-------
Tuber melanosporum Mel28
--------------------------------
-
Tuber magnatum
-------
Tuber borchii
-------
Talaromyces islandicus
-------
Talaromyces atroroseus
-------
-
Talaromyces marneffei ATCC 18224
-------
----
Talaromyces stipitatus ATCC 10500
-------------
Talaromyces cellulolyticus
--------------
Rasamsonia emersonii CBS 393.64
----------
Penicillium antarcticum
----------
-
Penicillium brasilianum Pbras_Allpaths-LG
-------------
Penicillium camemberti FM 013
-------------
Aspergillus nidulans FGSC A4 ASM1142v1
-------------
Aspergillus fumigatus
-------
-------
Aspergillus fischeri NRRL 181
----------
-
-
Aspergillus flavus NRRL3357
----------------
Aspergillus terreus NIH2624
----------------
Aspergillus oryzae RIB40
----------------
Aspergillus niger ASM285v2
----------------
Aspergillus clavatus NRRL 1
-----------------
Penicilliopsis zonata CBS 506.65
------------------
Byssochlamys spectabilis No. 5
------------------
Elaphomyces granulatus
----------
-
Coccidioides posadasii str. Silveira
----------
----
Coccidioides immitis H538.4
-------
-------
-
Paracoccidioides lutzii Pb01
----------------
Paracoccidioides brasiliensis Pb18
----------------
Trichophyton violaceum
----------------
Trichophyton benhamiae CBS 112371
----------------
Trichophyton mentagrophytes
----------------
Trichophyton tonsurans CBS 112818
----------------
-
Trichophyton equinum CBS 127.97
-------------------
Trichophyton interdigitale MR816
-------------------
Trichophyton rubrum CBS 118892
-------------
----
Trichophyton verrucosum HKI 0517
-------------------
Trichophyton soudanense CBS 452.61
----------
--------
Microsporum canis CBS 113480
-----------------
Nannizzia gypsea CBS 118893
-------------
Emmonsia sp. CAC-2015a
-------------
-
Blastomyces silveriae
----------------
Emmonsia crescens UAMH 3008
----------------
Blastomyces dermatitidis ER-3
-------------
-
Blastomyces gilchristii SLH14081
----------
----
Blastomyces percursus
-----------------
Histoplasma capsulatum NAm1
-----------------
Emergomyces pasteurianus Ep9510
-----------------
Helicocarpus griseus UAMH5409
---------------
-----------
Polytolypa hystricis UAMH7299
---------------------
Uncinocarpus reesii 1704
---------------------
Ascosphaera apis ARSEF 7405
-------------
-
Capronia epimyces CBS 606.96
----------------
Capronia coronata CBS 617.96
-------------
-
Phialophora americana
----------------
Phialophora attae
----------------
Cladophialophora bantiana CBS 173.52
----------------
Cladophialophora psammophila CBS 110553
-------------
-
Cladophialophora yegresii CBS 114405
----------------
Cladophialophora carrionii
----------------
Cladophialophora immunda
----------------
Fonsecaea monophora
-------------
----
Fonsecaea nubica
----------------
-
Fonsecaea pedrosoi CBS 271.37
-------------------
Fonsecaea multimorphosa CBS 102226
-------------------
Fonsecaea erecta
-------------------
Exophiala xenobiotica
-------------------
Exophiala oligosperma
-------------
-------
Exophiala aquamarina CBS 119918
-------------------
-
Exophiala mesophila
----
-------------------
Exophiala sideris
-------------------------
Exophiala dermatitidis NIH/UT8656
-------------
----------
Exophiala spinifera
-----------------------
Rhinocladiella mackenziei CBS 650.93
------------------------
Cyphellophora europaea CBS 101466
-------------------------
Phaeomoniella chlamydospora
-------------------------
Endocarpon pusillum Z07020
---------------------
-
Amorphotheca resinae ATCC 22711
----------------
Oidiodendron maius Zn
----------------
-
Erysiphe necator
-----------------
----
Erysiphe pulchra
--------------------
Blumeria graminis f. sp. hordei DH14
----------------
-
Sclerotinia borealis F-4128
----------------
----
Sclerotinia sclerotiorum 1980 UF-70 ASM14694v1
---------------------
-----------
Botrytis cinerea B05.10
-----------------------
-
Diplocarpon rosae
----------------------
Marssonina brunnea f. sp. 'multigermtubi' MB_m1
----------------------
-
Hyaloscypha variabilis F
-------------------
----
Meliniomyces bicolor E
--------------------------
Glarea lozoyensis ATCC 20868
----------------------
-
Phialocephala scopiformis
----------------
-------
Phialocephala subalpina
----------------
----
Rhynchosporium secalis
-------------------
-
Rhynchosporium agropyri
----------------------
Rhynchosporium commune
-----------------------
Cadophora sp. DSE1049
-------------------
Rutstroemia sp. NJR-2017a BVV2
--------------------
-
Rutstroemia sp. NJR-2017a WRK4
-------------------
Rutstroemia sp. NJR-2017a BBW
------------------------
Pezoloma ericae
----------------
-
Verticillium dahliae VdLs.17
------------------------
----
Verticillium longisporum vl2.denovo.v1
----------------------
Colletotrichum orbiculare MAFF 240422
-------------------
-
Colletotrichum higginsianum
-------------------
Colletotrichum fructicola Nara gc5
-------------------
Colletotrichum graminicola M1.001
-------------------
-
Scedosporium apiospermum
------------------------
----
Lomentospora prolificans
-------------------
-
Ceratocystis platani
-------------------
Thielaviopsis punctulata
-------------------
Cordyceps militaris CM01
-------------------
Beauveria brongniartii RCEF 3172
-------------------
-
Cordyceps confragosa RCEF 1005
-----------------------
----
Cordyceps fumosorosea ARSEF 2679
-------------------------
Cordyceps sp. RAO-2017
--------------------------
Beauveria bassiana ASM168263v1
----------
----
-------
Trichoderma atroviride IMI 206040
-------------------------
Trichoderma citrinoviride
-------------------------
Trichoderma gamsii
-------------------------
Trichoderma asperellum CBS 433.97
-------------------------
-
Trichoderma harzianum ASM98886v1
----------------------------
Trichoderma reesei QM6a
----------------------------
Trichoderma longibrachiatum ATCC 18648
--------------------------
----
Trichoderma guizhouense
----------------------------
Trichoderma parareesei
----------------------------
Trichoderma virens Gv29-8
-----------------------------
Escovopsis weberi
-------------------------
-
Fusarium verticillioides 7600
----------------------------
Fusarium fujikuroi EF1
----------------------------
Fusarium culmorum CS7071
-------------------------
-
-
Fusarium graminearum CS3005v1
-------------------------------
Fusarium pseudograminearum CS3096
-------------------
-
--------
[Nectria] haematococca mpVI 77-13-4
-----------------------------
Fusarium oxysporum f. sp. lycopersici 4287 FO2
------------------------------
Neonectria ditissima
---------------------------
-
Acremonium chrysogenum ATCC 11550
----------------------
Ustilaginoidea virens Assembly_for_version_1_of_the_Villosiclava_virens_genome
---------------------------
-
Stachybotrys chlorohalonata IBT 40285
----------------------
Stachybotrys chartarum IBT 40288
----------------------
-
Ophiocordyceps australis OphauG2
-------
----------------
Ophiocordyceps camponoti-rufipedis
----------------------
Tolypocladium capitatum
--------------------
-
-
Tolypocladium ophioglossoides CBS 100239
----------------------
Tolypocladium paradoxum
-----------------------
Purpureocillium lilacinum ASM165320v1
-----------------------
Drechmeria coniospora
-----------------------
Hirsutella minnesotensis 3608
-------------------
Metarhizium acridum CQMa 102
----------
-------
Metarhizium rileyi RCEF 4871
----------------
-
Metarhizium robertsii ARSEF 23
-------------------
Metarhizium album ARSEF 1941
-------------------
Metarhizium majus ARSEF 297
-----------------
-----
Moelleriella libera RCEF 2490
-----------------
Torrubiella hemipterigena
-----------------
Pochonia chlamydosporia 170
-----------------
Claviceps purpurea 20.1
-------------
Gaeumannomyces tritici R3-111a-1
---------------------
-
Magnaporthiopsis poae ATCC 64411
----------------
Pyricularia oryzae 70-15
----------------
-
Diaporthe helianthi
-----------------
----
Diaporthe ampelina
--------------------
Coniella lustricola
--------------------
Valsa mali var. pyri
----------------
Sporothrix brasiliensis 5110
----------------
-
Sporothrix insectorum RCEF 264
-----------------
----
Sporothrix schenckii ATCC 58251
--------------------
Grosmannia clavigera kw1407
----
-----------
--------
Ophiostoma piceae UAMH 11346
-------------------
-
Neurospora crassa OR74A
-------------------
----
Neurospora tetrasperma FGSC 2509
--------------------------
Sordaria macrospora k-hell
----------------------
-
Chaetomium thermophilum var. thermophilum DSM 1495
----------------
-
----
Chaetomium globosum CBS 148.51
--------------------------
Thermothelomyces thermophilus ATCC 42464
--------------------------
Thielavia terrestris NRRL 8126
---------------------------
Madurella mycetomatis
----------------------------
Phaeoacremonium minimum UCRPA7
----------------------------
Coniochaeta ligniaria NRRL 30616
----------------
-
Hypoxylon sp. CI-4A
-------------------
Daldinia sp. EC12
--------------------
Microdochium bolleyi
-------------------------
-----
Pseudomassariella vexata
-----------------
Eutypa lata UCREL1
-----------------
Rosellinia necatrix
-----------------
Pestalotiopsis fici W106-1
-----------------
-
Rachicladosporium sp. CCFEE 5018
----------------
Rachicladosporium antarcticum
-----------------
-
Baudoinia panamericana UAMH 10762
----------------
Hortaea werneckii EXF-2000
-------------
----
-
Pseudocercospora musae
----------------------
Pseudocercospora fijiensis CIRAD86
-------------------
-
Zymoseptoria brevis
----------------------
Zymoseptoria tritici IPO323
----------------------
Cercospora berteroae
----------------
-
-
Cercospora beticola
-------------------
Cercospora zeina
-------------
--------
Pseudocercospora eumusae
-----------------------
Sphaerulina musiva SO2202
-----------------------
Ramularia collo-cygni
-----------------------
Dothistroma septosporum NZE10
-------------------
Aureobasidium pullulans EXF-150
------------------------
-
Aureobasidium subglaciale EXF-2481
-------------------
Aureobasidium melanogenum CBS 110374
-------------------
Aureobasidium namibiae CBS 147.97
----------------------------
Elsinoe australis
----------------
-
Diplodia corticola
----------------
----
Diplodia seriata UCDDS831v0.1
-----------------------
Neofusicoccum parvum UCRNP2
------------------
-----
--------
Macrophomina phaseolina MS6
------------------------
Acidomyces richmondensis BFW
------------------------
Coniosporium apollinis CBS 100218
----------------
Stagonospora sp. SRC1lsM3a
------------------------
-
Paraphaeosphaeria sporulosa
-------------------
Periconia macrospinosa
-----------------------
-
Ascochyta rabiei
----------------------
Epicoccum nigrum
----------------------
-
Pyrenophora tritici-repentis Pt-1C-BFP
-------------------------
Pyrenophora teres f. teres 0-1
-------------------------
Bipolaris sorokiniana ND90Pr
-------------------------
Bipolaris zeicola 26-R-13
-------------------
-
-
Bipolaris oryzae ATCC 44560
-------------
-
-------
Bipolaris maydis C5
----------------------
Bipolaris victoriae FI3
-----------------------
Stemphylium lycopersici
-----------------------
Alternaria alternata
-----------------------
Exserohilum turcica Et28A
------------------------
Pyrenochaeta sp. DS3sAY3a
------------------------
Parastagonospora nodorum SN15
------------------------
Leptosphaeria maculans JN3
-------------------------
Clohesyomyces aquaticus
-------------------------
Corynespora cassiicola Philippines
--------------------------------------
Xylona heveae TC161
----------
-
Clavispora lusitaniae ATCC 42720
--------------
----
[Candida] auris ASM118947v1
-----------------
Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993
----
---------------
-
Nadsonia fulvescens var. elongata DSM 6958
----------------
Kuraishia capsulata CBS 1993
---------------------
-
Wickerhamiella sorbophila
----------------
Sugiyamaella lignohabitans
----------------
-
Cyberlindnera fabianii ASM320585v1
-------------------
Cyberlindnera jadinii
-----------------
-
-
Wickerhamomyces ciferrii
-------------------
Wickerhamomyces anomalus NRRL Y-366-8
----------------
-
Komagataella phaffii GS115 GCA_000027005.1
----------------
Komagataella phaffii GS115 ASM174695v1
----------------
-
Ogataea polymorpha
-------------------
Ogataea parapolymorpha DL-1
-----------------
-
-
Pichia kudriavzevii ASM76445v1
-------------------
Pichia membranifaciens NRRL Y-2026
--------------------
Brettanomyces bruxellensis AWRI1499
----------------
Hanseniaspora guilliermondii
----------------
Hanseniaspora osmophila
---------------------
-
Hanseniaspora opuntiae
----------------
Hanseniaspora valbyensis NRRL Y-1626
----------------
Hanseniaspora uvarum DSM 2768
----------------
Candida parapsilosis
----------------
-
Candida tropicalis MYA-3404
----------------
----
Candida albicans SC5314 Cand_albi_SC5314_V4
-----------------------
Lodderomyces elongisporus NRRL YB-4239
--------------------
-
Debaryomyces fabryi
-------------------
Debaryomyces hansenii CBS767
------------------------
Babjeviella inositovora NRRL Y-12698
-------------
---------
Spathaspora passalidarum NRRL Y-27907
------------------------
Scheffersomyces stipitis CBS 6054
------------------------
Meyerozyma guilliermondii ATCC 6260
------------------------------
------------
Millerozyma farinosa CBS 7064
---------------------
Suhomyces tanzawaensis NRRL Y-17324
---------------------
Hyphopichia burtonii NRRL Y-1933
-----------------
-
Tetrapisispora blattae CBS 6284
----------------
Tetrapisispora phaffii CBS 4417
-----------------
-
Kazachstania naganishii CBS 8797
----------------
Kazachstania africana CBS 2517
-----------------
-
Lachancea lanzarotensis
----------------
Lachancea dasiensis CBS 10888
----------------
-
Eremothecium gossypii FDAG1
-------------
----
Eremothecium gossypii ATCC 10895
--------------------
Eremothecium cymbalariae DBVPG#7215
-----------------
-
Naumovozyma castellii CBS 4309
----------------
Naumovozyma dairenensis CBS 421
----------------
Kluyveromyces marxianus DMKU3-1042
-----------------
-
Kluyveromyces dobzhanskii CBS 2104
----------
----
Kluyveromyces lactis
----------------
Zygosaccharomyces parabailii
-----------------
-
Zygosaccharomyces rouxii ASM2636v1
----------------
Zygosaccharomyces bailii CLIB 213
----------------
Saccharomyces cerevisiae S288C
----------------
Saccharomyces eubayanus
-----------------
-
Saccharomyces kudriavzevii IFO 1802
----------------
Saccharomyces sp. 'boulardii' ASM129837v2
----------------
Saccharomyces arboricola H-6
---------------------
Vanderwaltozyma polyspora DSM 70294
---------------------
Saccharomycetaceae sp. 'Ashbya aceri'
---------------------
Pachysolen tannophilus NRRL Y-2460
---------------------
Torulaspora delbrueckii
---------------------
[Candida] glabrata ASM254v2
----------------------
Ascoidea rubescens DSM 1968
----------------------
Tortispora caseinolytica NRRL Y-17796
----------------------
Yarrowia lipolytica YALIA101
----------------------
Lipomyces starkeyi NRRL Y-11557
----------
Pneumocystis murina B123
----------
-
Pneumocystis carinii B80
-------------
Pneumocystis jirovecii RU7
-------------
Schizosaccharomyces octosporus yFS286
----
-------
-
Schizosaccharomyces cryophilus OY26
------------------------------------------
----
Schizosaccharomyces japonicus yFS275
-------------
Schizosaccharomyces pombe 972h-
--------------
Protomyces lactucaedebilis
--------------
Saitoella complicata NRRL Y-17804 Scomplicata_3.0
--------------
Neolecta irregularis DAH-3
----------
-
Puccinia graminis f. sp. tritici 04KEN156/4
-------------
Puccinia graminis f. sp. tritici CRL 75-36-700-3
----------
-----
Puccinia triticina 1-1 BBBD Race 1
-----------------
Puccinia sorghi
----------
--------
Puccinia coronata var. avenae f. sp. avenae
--------------------
Puccinia striiformis
---------------------
Melampsora larici-populina 98AG31
-------------
-
Rhodotorula graminis WP1
------------------
-------
Rhodotorula toruloides ATCC 204091
-----------------
-
-
Microbotryum lychnidis-dioicae p1A1 Lamole
-------------------
Microbotryum intermedium
--------------------
Leucosporidium creatinivorum
-------------------------
Mixia osmundae IAM 14324 Mosmundae_2.0
-------------
-
Calocera cornea HHB12733
-------------------------
----
Calocera viscosa TUFC12733
--------------------
Dacryopinax primogenitus
-----------------------------
-
Wallemia mellicola CBS 633.66
----------------
Wallemia ichthyophaga EXF-994
------------------------
-
Trichosporon asahii var. asahii CBS 8904
-------------------
Cutaneotrichosporon oleaginosum
-------------------
Kwoniella pini CBS 10737
-------------------
-
Kwoniella dejecticola CBS 10117
-----------------
-------
Kwoniella bestiolae CBS 10118
----------------------
Cryptococcus amylolentus CBS 6039
-------------------
-
-
Cryptococcus depauperatus CBS 7841
-------------------------
Cryptococcus neoformans var. neoformans JEC21
-------------------------
Cryptococcus gattii WM276
----------------
--------
Tsuchiyaea wingfieldii CBS 7118
------------------------
Naematelia encephala
------------------------
Tremella mesenterica DSM 1558
------------------------
Kockovaella imperatae
------------------------
-
Fibularhizoctonia sp. CBS 109695
-------------------
Piloderma croceum F 1598
-----------------------
-
Rhizopogon vesiculosus
----------------------
Suillus luteus UH-Slu-Lm8-n1
----------------------
-
Paxillus involutus ATCC 200175
-------------------
----
Paxillus rubicundulus Ve08.2h10
----------------
--------
Hydnomerulius pinastri MD-312
----------------------
-
Pisolithus microcarpus 441
-------------------
----
Pisolithus tinctorius Marx 270
--------------------------
Scleroderma citrinum Foug A
-----------------------
-
Serpula lacrymans var. lacrymans S7.3
-------------------
Coniophora puteana RWD-64-598 SS2
-----------------------
-
Amanita muscaria Koide BX008
----------
----------
Amanita thiersii Skay4041
-----------------------
-
Moniliophthora roreri MCA 2997
----------------------
Moniliophthora perniciosa FA553
-----------------------
-
Laccaria bicolor S238N-H82
----------------------
Laccaria amethystina LaAM-08-1
----------------
--------
-
Termitomyces sp. J132
-------------------------
Hypsizygus marmoreus
--------------------------
-
Lentinula edodes
-------------------------
Gymnopus luxurians FD-317 M1
--------------------------
-
Hypholoma sublateritium FD-334 SS-4
-------------------
----
Galerina marginata CBS 339.88
--------------------------
-
Leucoagaricus sp. SymC.cos
-------------------------
Agaricus bisporus var. burnettii JB137-S8
-------------------------
Armillaria ostoyae
-------------------------
-
Armillaria gallica
----------------------
----
Armillaria solidipes
-----------------------------
Cylindrobasidium torrendii FP15055 ss-10
------------------------------
Schizophyllum commune H4-8
-----------------------
---------------------
Pleurotus ostreatus PC15
---------------------------
Fistulina hepatica ATCC 64428
---------------------------
Hebeloma cylindrosporum h7
---------------------------
Coprinopsis cinerea okayama7#130
----------------------------
Plicaturopsis crispa FD-325 SS-3
----------------------------
Jaapia argillacea MUCL 33604
----------------
-
Pyrrhoderma noxium
--------------------
----
Fomitiporia mediterranea MF3/22
-
--------------------
Schizopora paradoxa
------------------------
-
Sistotremastrum niveocremeum HHB9708
-------------------
Sistotremastrum suecicum HHB10207 ss-3
------------------------
-
Neolentinus lepideus HHB14362 ss-1
-------------------
Gloeophyllum trabeum ATCC 11539
----------
------------
-
Serendipita indica DSM 11827
----------------
Serendipita vermifera MAFF 305830
----------------
Rhizoctonia solani AG-1 IA
---------------------
-
Tulasnella calospora MUT 4182
----------------
Botryobasidium botryosum FD-172 SS1
----------------
Stereum hirsutum FP-91666 SS1
---------------------
-
Peniophora sp. CONT
----------------
Heterobasidion irregulare TC 32-1
--------------------
-
Fomitopsis pinicola FP-58527 SS1
-------------------
Daedalea quercina L-15889
----------
--------
-
Phlebiopsis gigantea 11061_1 CR5-6
-------------------
Phanerochaete carnosa HHB-10118-sp
--------------------
-
Wolfiporia cocos MD-104 SS10
-------------------
Laetiporus sulphureus 93-53
-------------------
Trametes versicolor FP-101664 SS1
-------------------
-
Trametes cinnabarina
-------------
-------
Trametes pubescens
----------------
----
Trametes coccinea BRFM310
-----------------------
Ganoderma sinense ZZ0214-1
-----------------------
Dichomitus squalens LYAD-421 SS1
------------------------
Gelatoporia subvermispora B
------------------------
Postia placenta Mad-698-R
------------------------
Fibroporia radiculosa
------------------------
Phlebia centrifuga
------------------------
Grifola frondosa
-------------------------
Punctularia strigosozonata HHB-11173 SS5
-------------------------
Exidia glandulosa HHB12029
--------------------------
Sphaerobolus stellatus SS14
----------
-
Moesziomyces aphidis DSM 70725
-------------
Moesziomyces antarcticus T-34
----------
-
Ustilago maydis 521
----------
----
Ustilago hordei
-----------------
Anthracocystis flocculosa PF-1
----------
--------
Sporisorium reilianum SRZ2
--------------------
Kalmanozyma brasiliensis GHG001
--------------------
Pseudozyma hubeiensis SY62
---------------------
Testicularia cyperi
-------------
Malassezia globosa CBS 7966
------------------
-
Malassezia sympodialis ATCC 42132 ASM34930v2
-------------
Malassezia pachydermatis
-------------
Malassezia vespertilionis
-------------
-
Jaminaea rosea
---------------
-------
Pseudomicrostroma glucosiphilum
----------
-
Acaromyces ingoldii
-------------
Meira miltonrushii
-------------
Tilletia controversa
-----------
-
-
Tilletia caries
-------------
Tilletia walkeri
-------------
Tilletia indica
--------------
Tilletiaria anomala UBC 951
--------------
Tilletiopsis washingtonensis
--------------
Ceraceosorus guamensis
-------------------
Violaceomyces palustris
-----------------------
-
Paramicrosporidium saccamoebae
----------
Rozella allomycis CSF55
-----------------------
-
Basidiobolus meristosporus CBS 931.73
----------
Conidiobolus coronatus NRRL 28638
-----------------------
-
Allomyces macrogynus ATCC 38327
----------
Catenaria anguillulae PL171
----------
-
Mortierella elongata AG-77
------------------
----
Mortierella verticillata NRRL 6337
-----------------
Lobosporangium transversale
---------