Schizosaccharomyces pombe (ASM294v2)
Description

ubiquitin C-terminal hydrolase Ubp16 [Source:PomBase;Acc:SPCC1682.12c]

Location
About this transcript

This transcript has 1 exon, is annotated with 13 domains and features and is associated with 31 variant alleles.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
ubp16SPCC1682.12c.12328457aa
 
Protein coding
O74442 -Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • UTR
Markup
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........acgcgactttatcgacacgaaaaattttcaaaaaatagcgatttctccct
1SPCC1682.12c.1:exon:1397,141394,814002,328
TTTCACAGTACCGGCGAGACAATTGGGGAAGGACTTGAGGAAGATATTACTTTTGGATCC
ATAAAGTTGTTTTCGTACATTAGATATCCATATCCTTTTCCGACTTTTTTGTCTTTCGTG
GGTAACGACGTTTGTTTACGTTACAGTAGTATTACCAGTTTTCTGGCGAGTTCTTTTCCC
TTAGTTGTTAAGAAGTTGATTGTTTTTATTGCTTTCCGCGTTTAAAAATATAAAACGCGA
AAGCACGTGTCGTTGTCTCTTTATCCTCTTTTTTGTTCTATGGAGTGTTAAATCGTAGAG
CTGGATAACTTCCATTTTTTATTTATACATTACTTTCAAAAATATTCGAAACACACAAAA
GTTGCCTGGTTTATTATTATATAGTTTTTTTGTTACGTTCTATCAAATTTTTGAAAACAC
GTCAAATCCTCGTTTCTAATTACCCGCCGAATTTTTTGCATCACTTTATATCCTTTTCAT
TTAAAAGTAATTTTAATCACTTTATCTACGGTTTCGTCTGCTTTACCACCTTTGCATTAT
TTTTTTCTAAATTCATTTACTACACCTATAGTGGCTGGTCATTTCAAAATAATTTGTGAG
TTTAAATTTTCTCATTGAACGCTTTTTTTTTGCTTTATTTTATTTTTGGTGTTTTTATTT
TCGACAACTCACGAATAAGTTTGTTTACATTCGTTTTTGTTGATTGTTTACATCAAACTG
CTTACTCCGTTCACAATAGCTCTTGAAGATAATTGTGAAAAGCATCACTCTTCTTTTCTA
CGTTTCTTGCTTTAAAAGATAGCTTTTTTTTTTCTTCTTTTCTAACATTTTTCTTCATAA
TTTCAAATTTTTGATTGCTTGTTGTTTTTCCATTCCGTTGTTGACATGTCGCTTGCTACT
TTACAAGGACAGTCACTAGATTTTGCAGTCAAGCATTCACTAGATGATTTGCTTAAAAAT
CCCGTTCGCTTTCGTCCCGCGGTTGTTTCCTCACCATCGGTTCCTGAAGGTACTTACACT
GTCTTAAACAATCCAAAGCAATCTACTGTTAGCCGTAAGTCATTTTCAGCGCCTACTTCC
CCAACTAGAAACAAACGTTCTGGTTCTTCTTCCCAGGAATACAAAAAATCTTCAGGAACA
AGGGGTGATGGAGCTAATGATTTTGTGGATGAGGATCCTGCTTTTATACCTCCGGCTCGC
ATTCTATTTCCCGAAGAAAAATTGTCGATGGAATGGGATAATATCATGCCCAATGCTCCG
GGGCTCGTAAATCTCGGTAATACTTGTTTCATGAATTCAGTACTTCAGTTGATGACTCAA
ACTCCACCGTTGGTTCAATATCTTTTATCCGGTCAACATTCTTTATCCTGCCGTATGAAT
GCATGTGTACTCTGTAGAATGGAGCAACATGTCGCCCGTGCCTATCCCAACAAAGGCACC
AAACGAGCTTCGGCCTTCAAACCTTCAGGTATACAAAGTATGCTCAAAGTAATTTCCAGT
CATTTCCGCCCATATCGCCAAGAAGATGCTCATGAATTTATGCGATATTTGGTTGATGCT
TGGCAAAAGTCTTGTCTTCAAAACCATAAAAATCTTGATCATCCAAGCAGGGAGACTTCG
GTAGTACACAGAATTTTTGGTGGTTACCTACGCCAGCAGATTCTATGCTCAGTTTGTAAA
AAACCTTCCAACACCTACCAAGCTTTACTTGACTTATCTGTGGATGCGAAGGGCTCCTCC
TTGGCAGATTCCTTAAAGCATTTTGTGCATGCAGAAAAACTTACCAAACAAAACAAATAT
CGATGTGAAAATTGTAAGCAACTGGTGGATGCGTCCAAGCAAATGACTATTTATCGGGCA
CCAAATATTTTAACCATTCACTTCAAGCGGTTCACATTCAACGGTTTCCAATCTAGCAAA
ATCAGTAAGCAAATTTCATACCCTGAATCATTCAATCTCGGTCCGTATATGTCAGATCCC
AATTGTTCTTGTTGGTACGAATTAATTGGGGTTCTTGTACATGCAGGCGGAAGTACCCGA
AGCGGCCATTATTATTCGTTTTGCAAAAGTAGTAATGGTGTTTGGCTTAAATTTGACGAT
GATTTCGTTTCCAATTCCAGTATTGATCGAGTTTTGAATCAACAGGCCTATATTTTGCAA
TACAAGAGGAAATCAACTTCATCGTCTAAACACAAGCTAAACACCGAAAACACGGTTACC
AAAACTTCTAATAAAAAACGGAGAAAAATTTCATTTTAATGCGATACAGTTAGCTTGAGC
AGTTAAAGTTTTTGCTTCCTTTTGCCTATCTTTTTTTTTAATATGCTA            
3' downstream sequence
atgtctctcttatttagaggttgatggtataatattattgcacgtagaac..........