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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
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Transcript: EEB05998 SJAG_01022-1

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Description

F-box protein Pof11

Location

SuperContig supercont5.1: 2,151,459-2,153,264 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 46 domains and features.

Gene

This transcript is a product of gene SJAG_01022 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
SJAG_01022-1	EEB05998	1631	495aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6JX97	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........agtgtggcgtaccgagaatgtgagagagctgggtaaatttgggacaagtc
1	EEB05998-1	2,151,459	2,151,585	0	1	127	TCGTGCCCATCTGCCATGGACAGTGAAGCTTTAAATGCAACAGATGAAGGATTTAACGAA ATTGGAACAGAATATGAACGAGAAACAGGAATTAAACTAAATGATTTAACGACAGAGCAA AAATTTG
	Intron 1-2	2,151,586	2,151,638			53	gtaggaatttctaagtaattggacc..........atgctaattccgtttatcgtcaaag
2	EEB05998-2	2,151,639	2,151,733	1	0	95	ATATCATTCAGCAATTGTTCTCTGAACTGCCCACTAGCAAGCTTTCACAGCTTTATGAAA AGCTAGGAAGTCTATTGCACAAAGATTTTCTTGAG
	Intron 2-3	2,151,734	2,151,855			122	gttcgttaagaaatcctattgtttt..........aatacagcaactaacggaaaactag
3	EEB05998-3	2,151,856	2,153,264	0	2	1,409	GTTTTGCCTGTTGAAATTTGTTTCCATGTGTTCCGGCTGCTGGGTGGCCGAGACTTGGTG AATTGTGCTCGGGTTTCCAGAAGTTGGAAACAGTACGTGGATGACCCGACGCTATGGAAG TGGTTGTTTGAACGGAATGGCTGGACGCTCAATCGAAGCGTTGTCTCAGAATTCGAGGAA TGGATTCGTATTCGGTTCTCCTTAAATTCTAGCAACTCAAAAAGCAACTTGGATGAGACA TTATACAGTACCTATATGGGCCCCCGGGGTACTCATTTTGCACCTTGTCATTGCTATGTC CGTGCAGATGGAAGCATCTGTTTAAATTGGAAGTATTTATACCAACAACGGTTACTTCTT CAAAGAAATTGGACAAATGGAAATTATGTACTTACACGGATAGTGTGCTCGAACAGACTA CACATGGACAGTGTGTACTGTGTTCAATTTGACGACCACTTTCTTTTCACAGGGTCGCGC GACAAAACAATCCGGGTATGGGAGCTCCAGGCTCGGCGATTGCTGTATGTACTCGCAGGA CATACCGGAAGTGTTCTCTGTTTACAATTTGACAAAAAACGGAACCTGTTGGTTTCTGGT TCCTCAGACACGACTATCATTGTTTGGGACCTGGCCACTCTAAAGCCCTTGCAAACATTC CGTGGCCATACAGACAATGTATTGGGTCTCGTGTTTCAAGATGACTACATTATTTCTTGT TCAAAAGACCACACAATTCGAGTCTGGCAGTACGGAGCTGCTGATGAAAATGCATGTTTA TATGTGCTTCGTGGGCATCTGGCTGCTGTCAATTCTGTCCAGTTTAACTCCAAAACACAT ATGATCGTGAGCGCCAGTGGTGATCATACAATTCGCATCTGGAACGTAAAAACAGGTCAA TGCCTTGGTGTGCTACACGGACATAGACGAGGCATTGCCTGTGTTCATTACGATGGAAAA AATATTATATCAGGCTCTTCAGACCTAACCGTTCGCATTTTCGATGGAAAAACTGGCCTC TTACTTCGTTCATTAGAGGGACACTCGGAACTTGTCCGGACATTGCAATGCGATATTGAA AAGGTTGTCACTGGAAGTTATGACGGAACCATAAAAATATGGGATCGAAATTCCGGATCA CTTTTGTGCGACTTAGGCAACAAACACGGAAGCCGCATTTTCAACTTACAGTTCGACCAC AAAAGGCTAATTAGCTGCAGTCAAGACAGCCAAATACTCATTTGGGACTTTGACTTAGGC GTTGATGGGACGTTTTTTTAATGGTTTTCTAATGTTTTTGTTTTTGTCTTTTTTTTTTCA TATCTGCTGCTTTGACTATTAAGGTTCTTTAGTTCTTTTCTTTTTTTTTTTCAAATTGTT TCTCAGTAAAGCATCCTTTCCTTATCTTT
	3' downstream sequence						attatttataatcataatttcatgttccaaaagattcctttcctcccgcg..........

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