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Sequence
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Transcript: EEB05597 SJAG_00615-1

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Description

ubiquitin-like protein modifier Ned8

Location

SuperContig supercont5.1: 3,004,764-3,005,489 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene SJAG_00615 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
SJAG_00615-1	EEB05597	488	77aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6JW46	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........aaatgtgccgttaaagagcgacagaattggattcctttatgggtcctcgc
1	EEB05597-1	3,004,764	3,004,866	0	0	103	GGTGGTGCACGAGTCGGTGAGAGCGCGAAATTAGTTTCATAGGAGCAGTCGGCGACGCTT CCTTTCGCCAACACCGTTTTCAACCATGCTGATCAAAGTAAAG
	Intron 1-2	3,004,867	3,004,921			55	gtacgagttctttgaaaatgttgtg..........ctagtaacgtgttttcgttgtgcag
2	EEB05597-2	3,004,922	3,004,939	0	0	18	ACCCTTACAGGAAAAGAG
	Intron 2-3	3,004,940	3,005,006			67	gtatgagcgttgtcctttcaaaatc..........ggtagctaattgcttttgtaattag
3	EEB05597-3	3,005,007	3,005,119	0	2	113	ATTGAGTTGGACATTGATCCAAACGACAAGGTTTCACGTATCAAAGAAAGAGTAGAAGAA AAGGAAGGAATTCCACCTTCTCAGCAGCGGTTAATTTTTGCTGGAAAACAAAT
	Intron 3-4	3,005,120	3,005,235			116	gtaagacgaaaacaggaggaagcat..........atctagatactaatgggcaattcag
4	EEB05597-4	3,005,236	3,005,489	2	1	254	GTCTGATGAGAAAAGTGCAGAGACGTACCACTTGGAAGGTGGAAGCGTGTTACATTTGGT ACTTGCACTTCGTGGAGGCAACTAGAAACATTCGTTTGCTGCACAACTGTCTTCAAGTAT TAGTTATCTTGAGTACCATGCCAATAACAAATAATGATCGTTTAATACATTCAGCAAAGT TCAAGTAAATCCTTCCCGTAGAAGATGACAGAGCAGAACAATGCCTAGCTTGGTTGGATA CCGTATGAATTAGA
	3' downstream sequence						ttttgtaaataccaccatagaagttgtcattctccaagcctttcgatacc..........

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