Saccharomyces cerevisiae (R64-1-1)
Description

Component of CORVET membrane tethering complex; vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis [Source:SGD;Acc:S000004138]

Location
About this transcript

This transcript has 1 exon, is annotated with 18 domains and features, is associated with 63 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene YLR148W Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
PEP3YLR148W_mRNA2757918aa
 
Protein coding
P27801 -Ensembl Canonical
Markup
  • loaded
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........agtaaaaactataaggtaccaagaagtaaaaagagaaatatagggatata
1YLR148W_mRNA-E1434,641437,397002,757
ATGATAAAAACACGTATAGAGGAAGTTCAGTTACAATTCCTCACAGGGAATACCGAACTT
ACGCATTTGAAAGTCTCCAATGATCAACTTATAGTAACGACACAACGGACAATTTACAGA
ATAAATTTACAAGATCCGGCCATCGTCAATCACTTTGACTGTCCATTAAGCAAGGAACTA
GAAACTATAATGAATGTTCATGTTTCACCAATGGGTAGTGTCATTCTTATTCGAACCAAC
TTTGGCCGGTATATGTTGCTAAAGGATGGCGAATTCACTCAATTGAACAAAATAAAAAAT
CTCGACCTCAGCTCGCTACATTGGATCAACGAAACCACCTTTCTGATGGGAATCAAGAAG
ACGCCCAAGTTGTACCGAGTTGAATTGACAGGAAAGGATATAACCACGAAGCTATGGTAT
GAAAACAAGAAACTCTCTGGTGGAATTGATGGCATTGCGTATTGGGAGGGCTCTCTGCTA
TTAACTATAAAAGACAACATTTTATACTGGAGAGACGTGACAAATATGAAATTTCCTTTA
GTATTACCAGATGAATCTGAGCAATTTGAAAGGTTAAAACATCATGCGATAAAGAAATTC
GATTCGTACAATGGACTCTTTGCTTGGGTCACATCCAATGGAATTGTCTTTGGTGATTTA
AAAGAAAAGCAAATGGAAAAAGATCCTGCTTCTAATAATTTTGGAAAATTCCTATCTTCG
TCGAAGGTTCTACTCAATTTCGAACTGCCTGACTACCAGAATGATAAAGATCACCTCATC
AAGGATATAGTTTTGACTGCTTTCCACATCCTGCTTTTGAGAAAAAATACGGTAACAATG
GTGAGTCAATTAAATAACGACGTAGTGTTTCATGAAACTATACCGAGACACCAGTTGACT
GGCTCCAACACTGATAGTAATGAGAAATTTTTAGGCCTAGTAAGAGATTCGGTGAAAGAA
ACGTTTTGGTGTTTCTCAAACATCAACGTCTTTGAAATTATTATCGAAAATGAGCCTAAT
TCGGTATGGAATTTATTAGTTCGGGATAACAAATTTGACAAGGCCCTATCGTTGAAAGGC
TTGACGGTGAGGGAAATAGAATCTGTAAAACTTTCAAAGGCAATGTACCTTTTCCACACT
GCTAAAGATTTTCATTCCGCGGCTCAAACTTTGGGAAGCATGAAGGACTTGTCACACTTT
GGGGAAATCGCATTGAATTTTCTCCAAATAAAAGATTACAACGATTTGAACGTAATATTG
ATAAAACAGTTGGATAACGTTCCCTGGAAATCAACTCAAGTCGTCTTGTCGAGTTGGATT
ATTTGGAATTTTATGAAACAATTGAATGATATTGAATTAAAGATAAACACAACTAAGCCA
GCTTCTACTGATGAAGACAATTTGCTAAACTGGAACCTGAATCTCAAGGAGAAATCGAAT
GAACTAACGAAATTTTTGGAAAGCCATCTAGAAAAACTTGATAATGAAACCGTTTATCAA
ATAATGTCCAAACAAAACCGGCAAAACGAATTATTGATTTTTGCTAGTCTAATCAACGAT
ATGAAGTTTTTATTATCATTTTGGATTGACCAAGGAAATTGGTATGAGTCCTTGAAAATT
CTGCTTACAATAAATAACCATGACCTAGTCTATAAGTACTCTTTGATTCTCTTATTGAAT
TCACCAGAGGCTACTGTGTCAACGTGGATGAAAATCAAAGACTTGGATCCAAATAAGTTA
ATTCCAACAATTTTAAAATTTTTCACAAATTGGCAAAATAATTCTAAACTGATTACTAAC
ATATCAGAATATCCTGAAAATTACTCACTGACATATTTGAAATGGTGCGTTAGAGAAGTC
CCAAAAATGTGTAATCCAATAGTGTACAATTCTATCCTTTACATGATGATTACTGATCCG
AGAAACGATATGATACTAGAAAATGATATAATCAAATTCATGAAATCAAACGAAAACAAA
TATGATCTTAATTTCCAGTTACGGTTGTCTTTAAAATTCAAGAAAACTAAGACCTCGATT
TTCCTTTTAACACGTTTAAACTTATTCGAGGATGCCATTGACTTGGCATTGAAAAATAAC
TTGATTGATGATTGTAAGGTAATTGTGAATGACGAGATTCTTATAGAGGATTATAAATTA
AGGAAAAGATTATGGCTGAAAATTGCAAAACACTTATTACTTTCAATGAAAGACATAGAT
ATAAAGCAATTAATTCGAACGATTTTAAATGATTCCAACGAAATTTTAACGATTAAGGAT
CTTTTGCCATTTTTTAATGAGTATACTACAATTGCTAACTTGAAAGAAGAACTGATCAAG
TTTTTAGAGAATCACAACATGAAAATGAATGAGATTTCAGAAGACATAATAAACTCCAAG
AATTTGAAGGTGGAAATAAACACAGAAATTTCTAAATTTAATGAGATTTACAGGATACTA
GAGCCAGGTAAGTCTTGTGATGAATGTGGTAAATTTCTACAGATCAAAAAGTTCATTGTT
TTCCCCTGTGGCCACTGTTTTCACTGGAACTGTATAATCAGGGTAATACTGAACTCAAAT
GATTATAACTTGAGGCAGAAGACGGAAAACTTCTTAAAGGCCAAAAGTAAGCATAATTTG
AATGATTTAGAAAATATCATTGTAGAGAAATGTGGATTGTGCAGTGATATCAACATCAAT
AAAATTGATCAGCCAATATCTATTGATGAAACAGAATTAGCCAAATGGAATGAATAG   
3' downstream sequence
tagtattcttttttagtcaggctgaaacactgaaattaaaagagggaaga..........