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Sequence
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Transcript: EDU43601

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Description

ubiquitin carboxyl-terminal hydrolase 2

Location

SuperContig DS231628: 377,283-378,524 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene PTRG_10551 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EDU43601	936	311aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2WKP1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gcgcaaaacaacaagcaagaagaacactccgacggcgccacccacccacc
1	EDU43601-1	378,524	378,489	0	0	36	ATGTCTGGGGGCTGGAACACCATCGAGTCCGATGCA
	Intron 1-2	378,488	378,344			145	gtaggactcctcttttacttttcct..........aatacaagcttaaaccacaaaacag
2	EDU43601-2	378,343	378,008	0	0	336	GGCGTCTTCACCTACCTCATCGAGAAGCTCGGCGTAAAAGACGTACAGTTTGAGGAGCTC ACCACGCTCGACCCGGCGGACCTACAAGCACTGGGAACACTCTACGGCGTCATCTTCCTG TTCAAATACCCGACGGGCGAGAAACCGAGTGATGTACCCAAGGATGGGACGTACGACTAC GAGGCGGCGAATACCCTCTTTTTCCCCGCGCAGACGATACAGAATGCATGTGGTACGCAA GCGATTGTGTCACTGTTGTTGAATCGGGAGGAGGAAGTGGATATTGGGAAGGAACTGAAA GAGTTCAAGGAGTTTGCGGGGGATTTCCCACCAGAG
	Intron 2-3	378,007	377,925			83	gtacgttagaaaaaaatagacatgc..........ctgacatacattggatacataatag
3	EDU43601-3	377,924	377,794	0	2	131	CTGCGAGGAGAAACGCTTTCAAACTCCGATCTCATCCGCGAAACACACAACTCGTTTGCG CGCTCCTCACCTTTTGTCGACGAGACACAGCGTACGGCAACCGAAGACGACGATGTATTC CATTTTATCGC
	Intron 3-4	377,793	377,716			78	gtaagtcctgccttcccttaccttc..........cagaaagtaacatataaatccacag
4	EDU43601-4	377,715	377,283	2	0	433	CTACACAAGCATAAACAACACCCTCTACGAACTCGACGGCCTACAACCAGCCCCCATATC CCACGGCCCCTGCAAGCCCCAGGACTTCCCCGCCAAAGTCATACCCGTCCTCCAGCGCCG CATCGCCCGCTACCCAGCCACGGAAATCCGCTTCAACCTCATGGCATGCTGTCGCGACCT GCGGATCCGCGCCCGTGAAATCGGCGACGAGGAGGAGCTTGAGGAGCAGGAGGATAAGCG CGCTCGCTGGCTGTGGGAGAACTCGCTCAGACGGCATAACTTCGTTGGCTTTGTGGGCGA GCTGCTGAAGGCGGTTGTAGCGGGTAAGTTGGAGAAGGGAGAGAAGGAGTATGAGGCGTG GGTTGAGGAGGCGGTGGTGAGGAGTAAGAAGAGGAATGAGGAGGCGAGGAAGCAGGGGAT TGCCGAGGATTGA
	3' downstream sequence						gcgggcgtatgtgtacgaagtactgctgttgtgagcgtggagaaggaggg..........

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