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    Pyrenophora tritici-repentis Pt-1C-BFP (ASM14998v1) ▼

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    Transcript: EDU45774

    Description

    transcription initiation factor TFIID subunit 5

    Location

    SuperContig DS231616: 2,831,043-2,833,642 forward strand.

    About this transcript

    This transcript has 3 exons and is annotated with 46 domains and features.

    Gene

    This transcript is a product of gene PTRG_03251 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -EDU457742190729aa
     
    Protein coding
    		B2VXK5 -Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    PANTHER47724-PTHR19879-
    CDD387651-cd00200-
    PROSITE profiles491523-PS50294-
    PROSITE profiles533566-PS50294-
    PROSITE profiles575612-PS50294-
    PROSITE profiles618651-PS50294-
    Prints468482G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints552566G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints637651G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    PROSITE profiles4779LIS1 homology motifPS50896IPR006594 [Display all genes with this domain]
    SMART4779LIS1 homology motifSM00667IPR006594 [Display all genes with this domain]
    Pfam4975LIS1 homology motifPF08513IPR006594 [Display all genes with this domain]
    Pfam92222TFIID subunit TAF5, NTD2 domainPF04494IPR007582 [Display all genes with this domain]
    CDD94228TFIID subunit TAF5, NTD2 domaincd08044IPR007582 [Display all genes with this domain]
    Gene3D74228TFIID subunit TAF5, NTD2 domain superfamily1.25.40.500IPR037264 [Display all genes with this domain]
    Superfamily82228TFIID subunit TAF5, NTD2 domain superfamilySSF160897IPR037264 [Display all genes with this domain]
    SMART375414WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam380414WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles382416WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART430481WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam434481WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles437490WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART484523WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam486523WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles491532WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART526565WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam528564WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles533574WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART568607WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam569606WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles575616WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART610650WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam614650WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles625651WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    PROSITE patterns637651WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    Superfamily378716WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D375525WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D526723WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    MobiDBLite147
    MobiDBLite2544
    Seg2649
    Seg611624
    Seg626639
    Seg672693
    Alphafold1729
    Alphafold1729

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