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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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- Population comparison
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Transcript: EFQ89086 PTT_14787-1

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Description

hypothetical protein

Location

SuperContig GL535981: 26,839-31,882 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 32 domains and features.

Gene

This transcript is a product of gene PTT_14787 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PTT_14787-1	EFQ89086	4302	1433aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3RYW4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........ccacatcacctcctttgctttcatatccctactcccggtgtctctcgacc
1	EFQ89086-1	26,839	27,530	0	2	692	ATGCCTCAAGAAGCCTCCAAGGTTTCCGATCCCGACGCAACCGAGCAAGCAGCGGCCGAA GCTGTCGCCGAATCGAGTAAACAGGCAGAAGCCGAATCCGCAGACGAGAGCGGCAATGAA GCAACAGAAACAGTAGAAGGTGCTGAGGGCGCATCGGAAAAGAAGAAGAAGAGCAGAAAG CGTAAGATCAAGGATGCTCTCAGCGGTAAAGGAAAGGCGGACGAGGTGACAGACATGAAT GCGCCTGCGAGTGGAATACTGCCAAAGGAAGCAATGCACATGTTGCTTGCAAACAACCCT GGGCTCGCCAATGAGCTCCAAGGCAAGGCGAATAGTAGAGAGGAGCTAGAGAATCTCGTG CGAAAGCTCAACCTCAACGAGATAATGACTGGGCTGGCACCTCAGGGCAGTCAAAAGGAC ATGGCCAGTCACGCATTCTGGAAAACACAACCGGTACCCAGCTTCGACGAGATGGCGAGC AAGGAGAAGATCAAGGACGGACCTATCAAGGAGATCAAGATTGAGGAGGTGGACAAGAAC CCCAGTCCCATGTACCCGGGCTTTGAGTGGGTTACTATGGACCTTGAAGACGAGAAACAA CTCCACGAAGTGTATGAGCTTCTCACCAACCACTACGTCGAAGACAAGGATGCAACATTT CGCTTCAACTACTCGCCGTCCTTCCTAGATTG
	Intron 1-2	27,531	27,575			45	gtaagctagaataatgtgactcctgtacctgactgacacgtgtag
2	EFQ89086-2	27,576	28,362	2	0	787	GGCCCTGAAAGCTCCTGGGTGGAAGAAGGAATGGCATGTCGGTGTCCGCGCGACCGCATC TGGCAAGCTCGTCGCCTTCATATCGGGAATCCCCATGCAGATGCGCATCCGCGAAAAGGT CCTCGACTGCTCCGAAGTAAACTTTCTCTGCATTCACAAGAAGCTGCGCTCGAAGCGGCT AGCACCCGTCCTGATCAAGGAGATCACCCGCCGCTGTTACGTCCAAGGTACATTCCAGGC TGTATACACCGCCGGCTCCCTTCTACCTACGCCTGTCTCGACTGCCCGCTACTTTCATCG CGCCCTCGACTGGGAGAAGCTGCATGATGTCGGATTCTCTCCCCTTCCCCCCAGCAGCAC CAAACAGCGCCAGATCATACGATATAAGTTGCCAGACACTACATCTACCCCCGGACTTCG TGAAATGGAAGCCAAGGATGTCGATGCAGCCCTCGATCTGCTAAAGCGATATCTTCAGCG CATGGATATGGCACAAGTCTTCAACAAAACCGAATTTGAGCATTGGATGGCGCCCAAGGA GAAGCCCAAGGAGCAGGTTGTCTGGAGCTACGTTGTTGAAGATCCCGACACTCATAAAAT CACCGATTACTTCTCCTTCTACAACCTCGAGAGCACTGTCATCGGAAACAAGAAGCATAA CACTATCAAGGCAGCATACTTGTTCTACTACGGTACCGAGGTCGCCTTTGAAAAGGAAAA GGACCAAGCAAAGTTGAAGCAGCGGTTGAACCTGCTGATGAAGGACGCGTTGATATTGGC CAAGAAG
	Intron 2-3	28,363	28,411			49	gtgagcactacagtctttgaaatgtggtgaattcaactaatcaagttag
3	EFQ89086-3	28,412	28,597	0	0	186	GCTAATTTCGACGTTTTCAACGCGCTAACACTTTTGGATAACCCTCTGTTCTTGGACGAG CAGCGCTTTGGTGCTGGTGACGGCTCACTGCACTACTATCTCTACAACTATCGCGCCGCG CCCATACCAGGTGGTATTGACTCACGAAGCCAGGCGAGCAAGGACCACATGGGGGGAATT GGGTTG
	Intron 3-4	28,598	29,245			648	gtcatgttgtaaccgaattttggca..........tcgcgcatcttctgaaatacacaag
4	EFQ89086-4	29,246	31,882	0	0	2,637	GATACAATGTCCGATCCTGAGGACCGATCGGTCATCGCCATGTACGACCCGAACGTAGCA CGCGGATGCGCCACACTGACCAATTTCGCGGACTTCACGAGACACATCAAGGAAAGCAAA TGCCGCCTGTGTAAAATGCCGCTCTTCGCGACGGAAACTAATATCCTCAACCTCTTCAAC GAGTGGATGAGCGACGACACACTTACACTATCATCTACTATCGAGTGCGAAAGCTGTGGG GCACTCTCTTGCATTACCTGCGCACAAAAGCCCTCAAAAAAGCCAACAAGCCATGCCAGC TTTGGATCAAATGACCTATCTTGGTGTTGCGCGGATGGTCGGCTCTTTCTCATATGGGCA TTACTGTGTGGTTTTGACCGACATGTCAAGGAGGGCAGCGACATCGACAAGAAGCGCAAG CCATCGGAGTCGAAGTCGGGTAGTCAGAATGAGAACCGCGCATGCGGTGGAGATGCAAAA CCCAAGGGCAGGCACAGTCAGCTCTCCTCCATGCCCAGTGGTATCGGTTACGGGCGGCAT GGTGGTCAGCAAGAGGATGTCCATCAATCAGCTACTCAGTCTTCATTGCAGAGTCAGAGC GCACAGATGGCCACAGATGACATGGGCGTACTGATTCTAAAGCTTTTGCAATATCTGCTT CCGTCTCTGGATCGAAAGACACACTTCGACCTTGATACTCCAGGCACGGTGCTTGAGATG CTTCGGAACAGCAAGTTACTCAACTATTGCGCTGAGCTCCTACGGAACGATCAACTCGTC GACATTACGAGGCGCAAGCACATCTACATTTGCTTGGTCAATTTTCTGGCAACGATTGGT TCGCATCCTAGCACGATCAAAGCCCTAACCTCTCCCCACTTTATACGCCCTGCCACGGTC GATATCTTAACGCTATCATTTTGTGATGATATTACCGAACCGGAAGAAGAAGGTTCGATA CTGGCTGCTTGCTTTCGTAAGCTCCTTGTTCAGAGCTCCTTGTTGCTGAAGAATGCGGAG GGAAACAAGCAAGACTTCCAAGATGATGATAGCCAGGTTATGATATCGATCTGTCGCCAA GTATCACTCCTTGGAAAGTTGGCCGAGCTAGACACTACAGCAGCAGCCACAGGAGAAGGC ACGGACAAGCTCGCAAGTGTAGCCAAGGATCTTGCAGTGAAAGAAATACCCGGCACACGG ATCAGATTGACGCACAGGTACGCCAATATAGGAGCATCGCTCACACAGTCCCCACCAGGA CGGCTCAAACGCCTAATCATCGAGATGACAATACTTCAAACAAGTCTTCCACCAGGAATC TATGTTCGGTATGGCGAAGACAGGCCTGATATTCTCAAGTGCATCATCACCGGCGCTGTT GGCACTCCTTACGAAAACGGACTGTTCGAGTTTGACATATACTGCACTCAGAACTTTCCA AACGCACCCCCCAAGGTGACATTCAAGGGTACAGGAAGCGGCACGGTAAGCATCAATCCG AACCTGTACAGCAACGGCTTTGTGTGCCTCTCCTTACTCGGGACCTGGGACGGAGAGCCT TGGGACCCTGCAGTATCGACACTGCTGCAGATCCTGGTATCCATCCAAGCCATGATACTG TGTGAGGAGCCATGGTACAACGAACCAGGACGAGAGATGCACTATTCGTCTGTCAATAAT AATCTTTCAAGAACGTACAACGCCGCCATTCGCAAAATGACGGTACGCTACGCTCTGCTG GATTGGCTTGAAAATCCACCGAGGCTGTGGCAAGACGTTGTAGACTACCACTTCAAAGAG CACGGCAACGCTATTCTAAAGACGGTGGAGGAATGGACAAGGGAGGCAAATACATCAGGT CCACGGCGTTCACCTCTGTTTGAGCATTATGAAGGCAGCTTACTGCCGACTCGGGGCGGG CCGAGTATGGGTAGTATGCTGCCAAGCTTGGTGACTGCTCTGAAGGACTACGGGACCACT TTCAAGGTCACCTACGAGGCGCCTATTGTAGACGAGAACAAGCATCCGCGTGCTCCGAAA CCGCCTTCATCATCAGCACCCCAGCTTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCG ACTTCGTTCGGTATGCCGCCTGGTTTGACGTCCTTCGTTTCCCATCCCAACCCCGACCCG TTGGAGAGTTCTTTGCCAGTTCTGCCTCCGCTGCCCCTGCTGTCATCGCCTGTTTCTTCT CCGATCTCGGGTTGGGCGGAATTGAATCCAGACACGCTAGAACATGACCTTATGACGCCT TCGCCATCGTCACCGTACTCCTCGCCGGAATATTTTGCACAGGATATGGACATGGCTGCC AAGAAAATGGCATCTGCAGGTAGAGGTGGTCACGCCGGAGTGCCAGCAAGCTCTCCTGGC CGTGGTGGTGGTAGTAGCAGTAGTGGTGCAGAGACACGTGGTGGACGCGGCGGTCCTGCT CCTGGTCTTGGCCGTGGACAACCTGTGATTTCGATTCTTGAAGAGTCGTCTCATAACACG AGTGGACCATTTAGAGGTTCTTCACGCGGTGGACGCGGCGGATACGATGGTCGTGGTGGA CGCGGTGGGCGTGGTGGACGTGGTGGACGTGGTGCTGGGGGTTTCCCTACCGCTTAG
	3' downstream sequence						agagagtacccacagagcatgtgcgagatgcattggatccgtctactcat..........

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