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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
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Supporting evidence
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- Transcript history
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Transcript: EFP92619 PGTG_18618/EFP92619

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Description

hypothetical protein

Location

SuperContig supercont2.107: 90,317-93,191 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 37 domains and features and is associated with 2 variant alleles.

Gene

This transcript is a product of gene PGTG_18618 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PGTG_18618/EFP92619	EFP92619	2637	839aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3L7U4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

loadingloaded

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........cccgggggggtgtggtggtggtcaagaggaagaccgcagtatacactttc
1	EFP92619-1	90,317	91,241	0	1	925	GGCAGAGGAGTGAACACGAACCATCAACTCATCAAACACGTAAATAGACAGAAGCAGACG ATGTCGCAAGTCAAGGAGAGTCTATCGATAGAAGAGACCAACAAGATCAGGATCTCACTC GGACTCAAACCACTACCAACCCCAGCAGACTCAACCAGCACAACCCAAGAACTCGATCCA GACCAACAAGCAGAAGAGAACTATAACAAACATCGTCAGGAGGAAGCCGATGGAGTAGCA TCAAAGAAAGTCGCAGAACGAGTCATCAAGGCAAAAGAGAATCGAGAACGATTAGCAAAA CTTAGTGGACGTGGTTTAGGAGAACTTGTACCATCGAATCATCAAGCAGGAGAAGACGAC GTAGACGATCTCAAGAAATGGGTCAAAAGACACAAGAAAAAATCAGCAAAGAACGACTCG CAGCTAGCAGCCAAGAAGAAAGAGGCTGAACTGAATGCGGATGAAGTAGAGTATGGCTCG CGAGATCTCGAAGGACTCAAGGTTGGACATGACCTGAAAGATATCGAATCGAATATGAAC GAAGAAGAGAAGATGGTCCTAACCCTCAAAGATTCCAAGATCCTAGACGGAGAGGATGAC GAACTAGAGAACGTCGAATTAGCCGAACAGAATCGAACCAAGGAGGCTTTCGAACTCAAA CGTCAAGGGCGACAGGCCGGGGAATACACCGGCTATGATGACGACGAATTCCTCAATCCC GGTCAATCGCAAACCGTACTTGCTAAATATTCCGATACTATCGATGGCAAAGTCGATAAA TCTTTTAGACTCGGTCATGATCATTCAGTCGATCAAGATCCTTCAAATCTTCACTCAACA ATCGATGCTACTAATCGATCTAAAATCACTAAAAAAGAAACCGCAGATATCCTCAAAAAA GATTTGCTCAGTTTGGACTATTCAA
	Intron 1-2	91,242	91,373			132	gtaaggtgacagcaaagcttcaagc..........tttcttattttacaaaaaaaaacag
2	EFP92619-2	91,374	92,500	1	0	1,127	AAACAATTGGTAATGATTATTTAGAAGAAGGTGATCCAGGTTTCAAGAAGAAGACAAAGA AAACAAAATCGAAGAAGAGCAAACAACGAGCTCCGACATCGACGGTCCCAGAGGAGGAAG CGGAAGACAGGCCGAAGGATGGGATGGATATAGACCCGCCTAATCCCAGACAACCGACAG TCGAGGCGGATGTGATAGATGATGAAGAGCTACAAGTAGCGATGTCACGGATGCGTAGGG AAGCAGGCAAGCTACGACGGAAGCATCACCAAACCGAACAAAAATCAGCCGACAAGTTAG ATCAGGATGAGGATATGATCGAGGCACGATCATCACTACCAGCTGAGAATGAAAAAGAAG AAGAAGAGGAGGAGGTAGAGGATGGCCGACTGGTGATCGATGATGCTTCGGAATTTATTC GGACGATCAGTCTGCAACAAGAACGGTTAGCCGAACTTCGTCGAAAGGAGGAAATCGCAC GAAACAAGCCCAAGCCGGTCTCGATCGAGCCCAGTCTTGGGGCGATTGCCGAGAGCGAGA CAGATTCGGTGATCGACGAGGAAGCCGAACGACGAGAGATGGAACGATTGATGGCCGGCG ATTCAGAGAAGGTTATTAAGCAGGACAAACCAGAGGTTGGGGAAGTGAAAGAAGTCGAAG ACGAGTCGACGAGTTATGGAGCGACCGGATCCGAGCAATATGTCTCGGGCGGGATGGCCT CGACCTTATCCTTACTCAAGTCACAAGGCCTGATCAAGCCTATGACTCCAGAAGAGAGAG AGAAAGAACGCCTATACAAGGAGAAGATGGCCTGGTTAATCGAACAACGGAGACGAGAAG CGGCGCGAGAGTTGGAGAAGGAGAAGACCAAGAAGATGGGTGATGCCAAAGACCAAGCCA CCCGGGAATACGAAAACAGGATGCGCGAGGCCGCCGCGGCTAAGGACGCCATGGAAGCTT ATCGGCATTATAAACCCGACGTCGAGATCAAATATAACGACGAGTTTGGCAGAGAGTTGT CGCGTAAAGAGGCTTGGAAAGCCCTTTCGCATAAGTTTCATGGCAAAGGTAGCGGCAAAG CTAAGACTGAAAAAAGAATCAAAAAAATCGAAGAAGAGAAAAAACTA
	Intron 2-3	92,501	92,606			106	gtaagtcattgctcatccattatct..........gggggtgtttggcttttttttgtag
3	EFP92619-3	92,607	93,191	0	0	585	GCAGCGATGGCATCAGGAGACACGCCTACGGGAACAAACGAAGCGTTCCGAAAGCGACAA GAGAAACTAGGGACGGCGACGATGATCTTATCGGTTGGAAACAAAGGCTCGGCGCCGCAT CAAGAGGAGTTCCTATCCTCCCTAGCGAAGCCCACAACCGGGACAAGCAATGGCGGCAAA AAGACCAAAGGAGGGGGCCGAGAAGGGAAAGAAGGGATCGGCGCCAATGCGATCAATCGA GCTCACAACAAACACACGATCTCTTCTGGTCCAGATCTTATGAACGGACTGGGCAGTCAC ATCCATTCGGTCATCGGCTCTTCCTCGTCGTCTCCGATGGACGGCTTCCACACCCCATCT GGGTTCATGGCTCCGCGAAAGGCCGGCTTCAAACCCATCTCTGCATCGAACTCTTCCTCG AACCTCAAGCCAAATCCTTCTTCTTTGGTATCCTCTGTGCTTGAGAATCTTCCGCCATCA ATCCTGCAAGTAAATCTAAATCTCCATCGGGCTTGTCGGCGCTGGTAAACGTAAAGCTGA CGACATTCCTGATGGATCTCCTGATAATAAACGTCCTGCTGCTTG
	3' downstream sequence						gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn..........

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