Transcript: EFP74239 (PGTG_00195/EFP74239) - Exons - Puccinia_graminis

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PGTG_00195/EFP74239	EFP74239	1776	342aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3JQY2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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▼▲


..........gtacagtggatggactgacaaagtgatgacttgaggtttaaatcttctga
AGGAAAGGGGGTGTTGTGAGTGGTTGATGTAGATAGACAAGAGCAGGAGGATGAAGTGGA
GTTGTCAAATACCCGATTTTGTTGTGCTGCCTCTCTCTTGAGTCACATTAAGTTGGACGA
ACTTCAACCAGAACATCTTACTCTCAACCTCAACTCGATGGCAGACCAACCTCAAACAAC
AACAACAACCCAGTCCAACCGAATCATCAATCAGTCAGCGAATGTCTCGGATTTGGATAT
CAGCTT                                                      
gtaagcacatcgacaaccatcctct..........atcaaatctccatacaccttcctag
GCATCCGTTACCCATCCTAAATATATCCGACCACTTCACTAGGACGCGTCTTCAGGCTGA
AAGACAAGATATAGACA                                           
gtcagtcccgcctcaactttatcta..........tttcttttttttcgaattgtatcag
TCTTTGGTGCTTTGATCGGTACACAGATCGGTAAAAAGATCGAAATCGTCAATTGCTTCG
AACTCTTAACTGATTCAGATGGGAAAGTCAACGATGGATTCCTGAAAACCAGAAGAGAAC
AAT                                                         
gtcagtattctatttttgcaatgcc..........gaaccaaaaaaaaaaaaaaaaaaag
TTCAACAGGTTTTTCCAACATTAGATCTACTGGGATGGTACACGAACGGGCCAGAGCCAC
GAGAAAAAGACCTAGCGATTCTGAACCAAGTGTCGGAATGTGTGGACCTCTCGAGTCCGA
TCCTCTTACTCTACGATCTTCTACCGACACCGTCTTCTTCAAGTGGCTCAACTACAGCCG
CCAAGGAGTTGCCGGTCCAGATCTACGAGTTCACTCAGGCCACAACGGGGGCCGATGGGG
AAGGATTCGTCAAGTGCACCTTCGACGTCCAAACTAGTGAGGCCGAACGCATCGCAGTGG
ATTGTGTGGCCAAACCTGACGTCGGAAGTAATGAGAGTGGCC                  
gttcgtatatttcagctcgaatatc..........ccccctcgatctttacgctgcgtag
TCGTCTCTAATTTGATCACCCAACGGAATGCCATCCAAATGCTGCACAACAAACTCGGAT
CGATCGTCGATTATCTAGCCCAATTGATGGCCGACCTCGAACCTGAAAATCCGACTGCTA
CTGCTACTAAGATCGACCATGGCCTGTTACGAGAGATATCTTCGTTGGTGGCTTCGTTGC
CTAAGCCCGATGAGAATGCTTCTTTCAAAAAGGAATACATGACC                
gtaagcatccttcatagtttttctt..........taaacctcctatgctctccatctag
GAATTCAATGATGCGTTGTTGACTTCATATCTCTCGAGCCAAAGTAAAGTGTTAACTGAG
ACTAACCAA                                                   
gttaagcatttcctcctcagctcct..........ggaacggatggttcatgctccttag
TTGATCGATCGATATCTCTATCTCAACGCTCGCGACAACAATCTCAAATTCGGCTCCAGC
TCTGCGAGTCACAGCGTTGGCAAATCGTTGAAAATGCCCAAATGATCTCACAACGATACC
CATTCTCCCCTTCTTTTTCAATCATTTAACGTGACATATAAATTGTCACATAAGTATGTC
TCAACAGCTTTCTTGGTATTCCGTTTTTATTTTTATTTTTTTTGTTTCTTCTTCGACCCT
CTTTGGTAGCGAATGTATTTATAAGAAGAAGGGAATCAAGTACTCAAGACAAGAGAAAGA
TCAGTGTGAGGTGGTCTGGGCAGGGCGTTTCTCATGGAACAAGCTGAATTGATTGACGAG
TTCCAGGATGTCTATCTTGATCATATTGGGATTGCCAATCTAGCCTGGAAGAGGAGGAAA
AACAGAAACTATGGACAAAAGGAGTTGGAGGCTCCAGCCATATGAAGCGTTGATCAAGAA
GTCGATGATGACCATTAGTAGGGAGAGCGAAATCCTCGATAGAGGGAGGCGCTCATAGCC
CTGCGCAACGATCCACTTCAGCCCACCCTCTAAACGAGCTCAAGGGGCCCTTCAATGAGC
CCCCGATAGCCGTCACCGATTCCTGCAGGACCGGCAAATTTGGAATATTCATCGTCACCA
ATATGTCTCTTGACAGCCCGACTGGCACCCCCCCC                         
ccccccaagataaccttccaaaagtaaaatgctttcgctagagcttaatg..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........gtacagtggatggactgacaaagtgatgacttgaggtttaaatcttctga
1	EFP74239-1	814,004	814,249	0	2	246	AGGAAAGGGGGTGTTGTGAGTGGTTGATGTAGATAGACAAGAGCAGGAGGATGAAGTGGA GTTGTCAAATACCCGATTTTGTTGTGCTGCCTCTCTCTTGAGTCACATTAAGTTGGACGA ACTTCAACCAGAACATCTTACTCTCAACCTCAACTCGATGGCAGACCAACCTCAAACAAC AACAACAACCCAGTCCAACCGAATCATCAATCAGTCAGCGAATGTCTCGGATTTGGATAT CAGCTT
	Intron 1-2	814,250	814,324			75	gtaagcacatcgacaaccatcctct..........atcaaatctccatacaccttcctag
2	EFP74239-2	814,325	814,401	2	1	77	GCATCCGTTACCCATCCTAAATATATCCGACCACTTCACTAGGACGCGTCTTCAGGCTGA AAGACAAGATATAGACA
	Intron 2-3	814,402	814,496			95	gtcagtcccgcctcaactttatcta..........tttcttttttttcgaattgtatcag
3	EFP74239-3	814,497	814,619	1	1	123	TCTTTGGTGCTTTGATCGGTACACAGATCGGTAAAAAGATCGAAATCGTCAATTGCTTCG AACTCTTAACTGATTCAGATGGGAAAGTCAACGATGGATTCCTGAAAACCAGAAGAGAAC AAT
	Intron 3-4	814,620	814,748			129	gtcagtattctatttttgcaatgcc..........gaaccaaaaaaaaaaaaaaaaaaag
4	EFP74239-4	814,749	815,090	1	1	342	TTCAACAGGTTTTTCCAACATTAGATCTACTGGGATGGTACACGAACGGGCCAGAGCCAC GAGAAAAAGACCTAGCGATTCTGAACCAAGTGTCGGAATGTGTGGACCTCTCGAGTCCGA TCCTCTTACTCTACGATCTTCTACCGACACCGTCTTCTTCAAGTGGCTCAACTACAGCCG CCAAGGAGTTGCCGGTCCAGATCTACGAGTTCACTCAGGCCACAACGGGGGCCGATGGGG AAGGATTCGTCAAGTGCACCTTCGACGTCCAAACTAGTGAGGCCGAACGCATCGCAGTGG ATTGTGTGGCCAAACCTGACGTCGGAAGTAATGAGAGTGGCC
	Intron 4-5	815,091	815,178			88	gttcgtatatttcagctcgaatatc..........ccccctcgatctttacgctgcgtag
5	EFP74239-5	815,179	815,402	1	0	224	TCGTCTCTAATTTGATCACCCAACGGAATGCCATCCAAATGCTGCACAACAAACTCGGAT CGATCGTCGATTATCTAGCCCAATTGATGGCCGACCTCGAACCTGAAAATCCGACTGCTA CTGCTACTAAGATCGACCATGGCCTGTTACGAGAGATATCTTCGTTGGTGGCTTCGTTGC CTAAGCCCGATGAGAATGCTTCTTTCAAAAAGGAATACATGACC
	Intron 5-6	815,403	815,484			82	gtaagcatccttcatagtttttctt..........taaacctcctatgctctccatctag
6	EFP74239-6	815,485	815,553	0	0	69	GAATTCAATGATGCGTTGTTGACTTCATATCTCTCGAGCCAAAGTAAAGTGTTAACTGAG ACTAACCAA
	Intron 6-7	815,554	815,654			101	gttaagcatttcctcctcagctcct..........ggaacggatggttcatgctccttag
7	EFP74239-7	815,655	816,349	0	2	695	TTGATCGATCGATATCTCTATCTCAACGCTCGCGACAACAATCTCAAATTCGGCTCCAGC TCTGCGAGTCACAGCGTTGGCAAATCGTTGAAAATGCCCAAATGATCTCACAACGATACC CATTCTCCCCTTCTTTTTCAATCATTTAACGTGACATATAAATTGTCACATAAGTATGTC TCAACAGCTTTCTTGGTATTCCGTTTTTATTTTTATTTTTTTTGTTTCTTCTTCGACCCT CTTTGGTAGCGAATGTATTTATAAGAAGAAGGGAATCAAGTACTCAAGACAAGAGAAAGA TCAGTGTGAGGTGGTCTGGGCAGGGCGTTTCTCATGGAACAAGCTGAATTGATTGACGAG TTCCAGGATGTCTATCTTGATCATATTGGGATTGCCAATCTAGCCTGGAAGAGGAGGAAA AACAGAAACTATGGACAAAAGGAGTTGGAGGCTCCAGCCATATGAAGCGTTGATCAAGAA GTCGATGATGACCATTAGTAGGGAGAGCGAAATCCTCGATAGAGGGAGGCGCTCATAGCC CTGCGCAACGATCCACTTCAGCCCACCCTCTAAACGAGCTCAAGGGGCCCTTCAATGAGC CCCCGATAGCCGTCACCGATTCCTGCAGGACCGGCAAATTTGGAATATTCATCGTCACCA ATATGTCTCTTGACAGCCCGACTGGCACCCCCCCC
	3' downstream sequence						ccccccaagataaccttccaaaagtaaaatgctttcgctagagcttaatg..........

Transcript: EFP74239 PGTG_00195/EFP74239

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Transcript: EFP74239 PGTG_00195/EFP74239

Exons

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