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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EFP87309 PGTG_12893/EFP87309

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Description

hypothetical protein

Location

SuperContig supercont2.44: 551,547-552,855 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features and is associated with 37 variant alleles.

Gene

This transcript is a product of gene PGTG_12893 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PGTG_12893/EFP87309	EFP87309	1149	382aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3KSM3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	8	370	Peroxisome biogenesis factor 2/10	PTHR23350	IPR025654 [Display all genes with this domain]
Pfam	22	234	Pex, N-terminal	PF04757	IPR006845 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	252	275
MobiDBLite	255	275
Seg	16	42
Seg	53	66
Seg	145	160
Seg	213	241
Seg	258	266
Alphafold	1	382

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