Gene/transcipt that contains an open reading frame (ORF).Protein coding
A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
[["rect",[150,5,180,10],{"title":"Exon: TFL06503-1; Location: <a href=\"/Pterula_gracilis_gca_004369125/Location/View?db=core;g=BDV98DRAFT_559526;r=ML178815:1116935-1119218;t=TFL06503\">ML178815:1116935-1119218</a>; First aa: 1 ; Last aa: 20 (2nd base); Start phase: 0; End phase: 1; Length: 59bp, 19 2/3 aa"}],["rect",[177,5,363,10],{"title":"Exon: TFL06503-2; Location: <a href=\"/Pterula_gracilis_gca_004369125/Location/View?db=core;g=BDV98DRAFT_559526;r=ML178815:1116935-1119218;t=TFL06503\">ML178815:1116935-1119218</a>; First aa: 20 (3rd base); Last aa: 146 (2nd base); Start phase: 2; End phase: 1; Length: 378bp, 126 aa"}],["rect",[361,5,506,10],{"title":"Exon: TFL06503-3; Location: <a href=\"/Pterula_gracilis_gca_004369125/Location/View?db=core;g=BDV98DRAFT_559526;r=ML178815:1116935-1119218;t=TFL06503\">ML178815:1116935-1119218</a>; First aa: 146 (3rd base); Last aa: 243 ; Start phase: 2; End phase: 2; Length: 292bp, 97 1/3 aa"}],["rect",[504,5,576,10],{"title":"Exon: TFL06503-4; Location: <a href=\"/Pterula_gracilis_gca_004369125/Location/View?db=core;g=BDV98DRAFT_559526;r=ML178815:1116935-1119218;t=TFL06503\">ML178815:1116935-1119218</a>; First aa: 244 ; Last aa: 292 (2nd base); Start phase: 0; End phase: 1; Length: 146bp, 48 2/3 aa"}],["rect",[573,5,628,10],{"title":"Exon: TFL06503-5; Location: <a href=\"/Pterula_gracilis_gca_004369125/Location/View?db=core;g=BDV98DRAFT_559526;r=ML178815:1116935-1119218;t=TFL06503\">ML178815:1116935-1119218</a>; First aa: 292 (3rd base); Last aa: 328 (2nd base); Start phase: 2; End phase: 1; Length: 108bp, 36 aa"}],["rect",[626,5,668,10],{"title":"Exon: TFL06503-6; Location: <a href=\"/Pterula_gracilis_gca_004369125/Location/View?db=core;g=BDV98DRAFT_559526;r=ML178815:1116935-1119218;t=TFL06503\">ML178815:1116935-1119218</a>; First aa: 328 (3rd base); Last aa: 355 (1st base); Start phase: 2; End phase: 0; Length: 80bp, 26 2/3 aa"}],["rect",[665,5,998,10],{"title":"Exon: TFL06503-7; Location: <a href=\"/Pterula_gracilis_gca_004369125/Location/View?db=core;g=BDV98DRAFT_559526;r=ML178815:1116935-1119218;t=TFL06503\">ML178815:1116935-1119218</a>; First aa: 355 (2nd base); Last aa: 581 ; Start phase: 1; End phase: 2; Length: 680bp, 226 2/3 aa"}],["rect",[15,5,64,14],{"klass":["label","SdiKNWjP"],"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)"}],["rect",[735,15,781,20],{"title":"MobiDB lite; Position: 402-433"}],["rect",[740,15,767,20],{"title":"MobiDB lite; Position: 405-423"}],["rect",[815,15,996,20],{"title":"MobiDB lite; Position: 457-580"}],["rect",[830,15,863,20],{"title":"MobiDB lite; Position: 467-489"}],["rect",[895,15,937,20],{"title":"MobiDB lite; Position: 512-540"}],["rect",[15,15,82,29],{"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)","klass":["label","Iob62R0N"]}],["rect",[387,31,410,36],{"title":"Low complexity (Seg); Position: 163-178"}],["rect",[438,31,468,36],{"title":"Low complexity (Seg); Position: 198-218"}],["rect",[740,31,761,36],{"title":"Low complexity (Seg); Position: 405-419"}],["rect",[919,31,940,36],{"title":"Low complexity (Seg); Position: 528-542"}],["rect",[15,31,136,45],{"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)","klass":["label","xQ1scUf6"]}],["rect",[151,47,996,52],{"title":"AFDB-ENSP mappings; Position: 1-580"}],["rect",[15,47,124,61],{"klass":["label","9FLKZimK"],"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)"}],["rect",[184,63,647,77],{"title":"Superfamily SSF56112; Positions: 24-341; Interpro: IPR011009; Protein kinase-like domain superfamily","href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=4790848;r=ML178815:1116935-1119218;t=TFL06503;track=domain_superfamily;translation_id=1811"}],["rect",[15,63,82,77],{"klass":["label","n6upOwMM"],"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)"}],["rect",[187,85,646,99],{"title":"SMART SM00220; Positions: 26-340; Interpro: IPR000719; Protein kinase domain","href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=20700176;r=ML178815:1116935-1119218;t=TFL06503;track=domain_smart;translation_id=1811"}],["rect",[15,85,46,99],{"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)","klass":["label","Aj9Xs0R5"]}],["rect",[192,107,646,121],{"title":"Pfam PF00069; Positions: 29-340; Interpro: IPR000719; Protein kinase domain","href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=23841091;r=ML178815:1116935-1119218;t=TFL06503;track=domain_pfam;translation_id=1811"}],["rect",[15,107,40,121],{"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)","klass":["label","j0ahX2HY"]}],["rect",[187,123,646,137],{"title":"PROSITE profiles PS50011; Positions: 26-340; Interpro: IPR000719; Protein kinase domain","href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=23841095;r=ML178815:1116935-1119218;t=TFL06503;track=domain_pfscan;translation_id=1811"}],["rect",[15,123,112,137],{"klass":["label","sJAkUQ59"],"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)"}],["rect",[372,145,637,159],{"href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=23841092;r=ML178815:1116935-1119218;t=TFL06503;track=domain_scanprosite;translation_id=1811","title":"PROSITE patterns PS00108; Positions: 153-165; Interpro: IPR008271; Serine/threonine-protein kinase, active site"}],["rect",[196,164,389,178],{"href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=23841093;r=ML178815:1116935-1119218;t=TFL06503;track=domain_scanprosite;translation_id=1811","title":"PROSITE patterns PS00107; Positions: 32-62; Interpro: IPR017441; Protein kinase, ATP binding site"}],["rect",[15,145,112,159],{"klass":["label","R8ClA0C6"],"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)"}],["rect",[177,187,963,201],{"title":"PANTHER PTHR48014; Positions: 19-558; Interpro: IPR047173; STE20-related kinase adapter protein alpha/beta-like","href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=23841094;r=ML178815:1116935-1119218;t=TFL06503;track=domain_hmmpanther;translation_id=1811"}],["rect",[15,187,58,201],{"klass":["label","0BfvPOhZ"],"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)"}],["rect",[168,209,312,223],{"href":"/Pterula_gracilis_gca_004369125/ZMenu/Transcript/ProteinSummary?config=protview;db=core;g=BDV98DRAFT_559526;pf_id=4790846;r=ML178815:1116935-1119218;t=TFL06503;track=domain_gene3d;translation_id=1811","title":"Gene3D 3.30.200.20; Positions: 13-111"}],["rect",[15,209,52,223],{"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)","klass":["label","0HHBNuUv"]}],["rect",[15,231,70,245],{"klass":["label","dMijQgYM"],"alt":"Pterula gracilis str. CBS 309.79 (Pterula gracilis str. CBS 309.79)"}]]
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Cleavage site (Signalp)
Signal peptide cleavage sites predicted by SignalP.
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MobiDB lite
Intrinsically disordered regions predicted by MobiDB lite.
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Low complexity (Seg)
Low complexity peptide sequences identified by Seg.
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AFDB-ENSP mappings
Protein features that represent the mapping between Ensembl proteins (ENSP) and AlphaFoldDB protein structures (including their corresponding chains). Imported via UniProt mappings
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Superfamily
Protein domains and motifs from the SUPERFAMILY database.
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SMART
Protein domains and motifs from the SMART database.
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Pfam
Protein domains and motifs from the Pfam database.
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PROSITE profiles
Protein domains and motifs from the PROSITE profiles database.
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PROSITE patterns
Protein domains and motifs from the PROSITE patterns database.
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