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    Microbotryum violaceum (GCA_000166175.1) ▼

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    Transcript: MVLG_05441T0

    Description

    NEDD8-conjugating enzyme UBC12 [Source:BROAD_M_violaceum;Acc:MVLG_05441]

    Location

    SuperContig supercont1.74: 8,016-9,688 forward strand.

    About this transcript

    This transcript has 7 exons and is annotated with 11 domains and features.

    Gene

    This transcript is a product of gene MVLG_05441 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -MVLG_05441T0849179aa
     
    Protein coding
    		U5HE95 Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    • UTR
    Markup
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........atcaagccattacgaaccgcgatcgagcgtgcctctcccgccggcgctcg
    1MVLG_05441-E18,0168,169--154 
    CCGCTCGCTACTTGTCCATCATCATCCCATCCTGTCCCGTCCCACTGGGCAACCGAGTTC
ACCTGTTCGCTCGCTTTCGGATCGGATCGTTCATCTCAGTCCGTTGACTCTAGACACTTC
GTACACCACTAGGAGCTCCTACATCCCCCCCAAG
     Intron 1-28,1708,630461 
    gtgcgttcccctaccccaactccat..........ttaattcacactttattcgccacag
    2MVLG_05441-E28,6318,639009 
    ATGATCAAA
     Intron 2-38,6408,72384 
    gtaagcttttacccaatcgccacat..........gtcttgactgactttgtgatcgcag
    3MVLG_05441-E38,7248,8050182 
    ATTTGGTCCATGAAGAAGAACGAGGATGCCGCAGCAAAGAAAAAGCCCAAGACCTCAGCA
GCCCAGATTCGAGTACAGAAAG
     Intron 3-48,8068,86964 
    gtaggcgcggctttcttatatcgtc..........tcatctgccattgaccctccctcag
    4MVLG_05441-E48,8708,9651196 
    ATCTCACCGAGCTTGACCTCCCACCAACGATGAAGACCCATTTCGCCGATGCCGAGGACT
TGCTTAACTTTGAGCTTACCATCACCCCCGACGACG
     Intron 4-58,9669,02762 
    gtcagtattgcaatacatgttcaac..........catcaagcgcggaacctcagcacag
    5MVLG_05441-E59,0289,1161089 
    GCATGTACAAGGGCGGCAAATTCCTCTTTACTGTCAAGATCAGCGCCAACTACCCACATG
AACCCCCAAAAGTCAAATGCGTACCCAAA
     Intron 5-69,1179,18367 
    gtaggtctttgcagacttcagttcc..........ttaaccctttggctcgtatttgcag
    6MVLG_05441-E69,1849,33101148 
    ATCTATCACCCCAATCTGGACCTCGAAGGCAACGTGTGCCTCAACATCCTGCGTGAGGAC
TGGAAGCCCGTGCTCAGTCTCAACGCCGTCATGGTCGGATTGCAGTACCTCTTCCTCGAA
CCCAATGCCGATGATCCGCTCAACAAAG
     Intron 6-79,3329,41786 
    gtatgtcgttgacgtggcgcactcg..........gactgcttcttttgacatcccacag
    7MVLG_05441-E79,4189,6881-271 
    AAGCGGCCAAGGATCTGCGGGAGAACCGATCACGGTTTGCACAAAACGTTCGTTCTAGCA
TGAGGGGAGGCTACGTCGGAGACGAGAAGTTTGATGATGTTCGAGTTGGAGCATAGGCGA
GTACGGGAGGACCGGGACGTAGTGCAGCGTGTGTTAGCATCATCATCATTCGCACTGGCG
ACGATTTCGAACTACGGGGAAGGTGCTTTTGAGGAGTTTTGTTTCGTCCTCTATCACGTT
TTCGTTGTGTAATCATGCATTTTCCGATCAC
    3' downstream sequence 
    ttcttttcatttcttcgaggtgcagcttgcacaacgagaggaggctttgc..........

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