Microbotryum violaceum (GCA_000166175.1)
Description

ubiquitin-conjugating enzyme E2-18 kDa [Source:BROAD_M_violaceum;Acc:MVLG_03979]

About this transcript

This transcript has 7 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene MVLG_03979 Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-MVLG_03979T0930174aa
 
Protein coding
U5H9U1 Ensembl Canonical
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • Intron sequence
  • UTR
Markup
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........tgctggcccggttgcgctcggacctctcgagagtcaagcgcgcgtggtca
1MVLG_03979-E122,80722,662-0146
GCACTTCGCTCCTCGCCTCTTCATCTCTCCAATCTCCGTGCGATCCTGACCAGTTCGATC
CAGCCCGTCTCCAACTCAAAGTCCTCATCATGAACTCGAACAACCGATCAGCGATGAACA
CCGCACTCAAGCGGCTCATGACCGAG                                  
 Intron 1-222,66122,57587
gcaagtcgacgacgcgacagacacc..........atcgacccatccattgcctccacag
2MVLG_03979-E222,57422,5260149
TACAAGCAGTTGACCGCATCAGAGAACGAGGACAGCATGTTCACCGCGG           
 Intron 2-322,52522,395131
gcaagtcccatacacccctttcagt..........cacccctctctcggcgatcgcacag
3MVLG_03979-E322,39422,26410131
GCCCGATCTCGGAGAACGACTTTTTCATCTGGTCCGCGTTGATCCAAGGCCCTTCGGAAA
CCCCGTTCGAAGGTGGCGTCTTCGAGGCCGAATTGACCTTCCCGCGCGACTACCCGCTCA
GCCCGCCCAAG                                                 
 Intron 3-422,26322,067197
gtgagcaacacgtcaggcacactcg..........cgggtcattctttcggagcccatag
4MVLG_03979-E422,06622,0330134
ATGAAGTTCACACCACCCTTGTTCCACCCCAATA                          
 Intron 4-522,03221,96271
gtcagttgaagtcttcgtatcctat..........ccggcatcgtcgtcccctcccccag
5MVLG_03979-E521,96121,82111141
TCTATGCCTCGGGAGATGTCTGCATCTCGATTCTCCACTCCCCCGGCGACGACCCCAACG
CGTACGAGTCTTCGTCCGAACGATGGTCCCCCGTCCAATCCGTCGAAAAGATCCTCTTGT
CCGTCATCAGCATGCTCGCAG                                       
 Intron 5-621,82021,75170
gtacgtccaatttccaccaaagcac..........actgatctgggttttccactcgcag
6MVLG_03979-E621,75021,7131038
AACCGAATATCGAGTCCGGCGCCAACATTGACGCATGT                      
 Intron 6-721,71221,64172
gcaagttctctccttctcacgcact..........cagtccatcatttttccctctccag
7MVLG_03979-E721,64021,2500-391
AAACTTTACCGAGACAACCGCGAGGCGTACGACGACATGATTCGCCAACACGTTAGGCAA
CAACTCGACCTGTGAACCGCATTCCTGCCTATTCCGAGAAAGGACGATCTTGATTTCTCT
TACATAGTCCCCACTAGTCCTTTAACAATCCGACTTGACCCACGACCCACTCTACCACCC
TAGTTCCTAGCCTCACACCCTGTAGGCATTACGCAAATAATCATCTACCCCGTCGTTACA
TCTCACAGCAAAGTAGACGGGCCCCCTTTTCGAGTTTTGATTTCAATTACACTTCACACC
CAGCACAATACCCGTTCCACACGCACCCTTCAAACCCTCCTCGGTGGTTCCAACACCGTC
CGCAATTCTTTCTCCCTGTCCTCCTTCTCAG                             
3' downstream sequence
cttcgggcaacacctcgtcgattggcgtgaccttgacttggatcttgtcc..........