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    Leptosphaeria maculans (ASM23037v1) ▼

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    Transcript: CBY01910

    Description

    Similar to ubiquitin-conjugating enzyme E2 [Source:UniProtKB/TrEMBL;Acc:E5AFC1]

    Location

    SuperContig FP929139: 2,593,032-2,593,955 forward strand.

    About this transcript

    This transcript has 5 exons and is annotated with 33 domains and features.

    Gene

    This transcript is a product of gene LEMA_P006970.1 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -CBY01910444147aa
     
    Protein coding
    		E5AFC1 -Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    Markup
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........accaccacacccacacacccttctacgcacaaccccacacacttgccgcc
    1CBY01910-12,593,0322,593,0750244 
    ATGGCCCTCAAGCGCATTAACAAGGAGCTCACTGACCTCGGCCG
     Intron 1-22,593,0762,593,285210 
    gtacgtgttgcctccttcccagccc..........attttggctaacatgaaacccacag
    2CBY01910-22,593,2862,593,3312046 
    CGACCCTCCCTCCTCCTGCTCAGCTGGTCCCATCGGAGATGATCTG
     Intron 2-32,593,3322,593,433102 
    gtacgccactcgtggtgcaaaatcc..........caaagtttgctaacagttgcgatag
    3CBY01910-32,593,4342,593,4630030 
    TTCCACTGGCAAGCAACCATCATGGGTCCT
     Intron 3-42,593,4642,593,579116 
    gtacgtacattctcgatatactgag..........caacacaactgacaatctgtaatag
    4CBY01910-42,593,5802,593,76301184 
    AGCGATTCACCATATTCGGGCGGCGTATTCTTCCTAGCCATCCACTTCCCAACCGACTAC
CCTTTCAAGCCCCCGAAGGTCAACTTCACCACCCGCATCTATCACCCCAACATCAACTCG
AATGGCAGCATTTGCCTAGATATTCTGCGAGACCAGTGGAGCCCTGCTCTTACCATTTCA
AAGG
     Intron 4-52,593,7642,593,81552 
    gtaggtggagagatgcccgtggctt..........attcggtttactaacgcaagtgtag
    5CBY01910-52,593,8162,593,95510140 
    TGTTGCTGAGTATTTGCTCGATGCTGACAGACCCGAACCCCGACGACCCGCTCGTCCCTG
AGATTGCACATGTCTACAAGACGGACAGATCTCGCTACGAGTCGACAGCGCGCGAGTGGA
CCCGAAAGTACGCCATCTAG
    3' downstream sequence 
    agcaggcaggcgtaggatggtgaaggacggtctctctgctcttcacgaca..........

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