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    Leptosphaeria maculans (ASM23037v1) ▼

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    Transcript: CBX98561

    Description

    Similar to RNA polymerase II Elongator subunit [Source:UniProtKB/TrEMBL;Acc:E5A4L3]

    Location

    SuperContig FP929134: 178,372-180,813 forward strand.

    About this transcript

    This transcript has 2 exons and is annotated with 41 domains and features.

    Gene

    This transcript is a product of gene LEMA_P078000.1 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -CBX985612397798aa
     
    Protein coding
    		E5A4L3 -Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    CDD52427-cd00200-
    PROSITE profiles5489-PS50294-
    PROSITE profiles105138-PS50294-
    PROSITE profiles395427-PS50294-
    PROSITE profiles616648-PS50294-
    PANTHER4797Elongator complex protein 2PTHR44111IPR037289 [Display all genes with this domain]
    Prints7791G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints124138G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints228242G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Superfamily359798Quinoprotein alcohol dehydrogenase-like superfamilySSF50998IPR011047 [Display all genes with this domain]
    SMART241WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART4790WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam5289WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles5489WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART98137WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam100136WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles105138WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART196241WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam199240WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles203250WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART282323WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART342381WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART388427WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam395427WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles395427WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART437475WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART561605WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART608648WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam616647WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles616657WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART655696WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles663705WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART751796WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Superfamily13427WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D7154WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D166342WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D360661WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D662798WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    Seg345355
    Seg708718
    Alphafold1798

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