▼

Favourite species

All species

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Export data

Share this page

Bookmark this page

.

Transcript: FOXG_03660T0

.

Description

conserved hypothetical protein [Source:BROAD_F_oxysporum;Acc:FOXG_03660]

Location

Chromosome 8: 3,199,415-3,201,383 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 21 domains and features and is associated with 8 variant alleles.

Gene

This transcript is a product of gene FOXG_03660 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	FOXG_03660T0	1917	518aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D2XIA7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Exons

.

Download sequence

Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

loadingloaded

▼▲

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........atatcacatacaagagacacttcaataaagtccaattcaaacttcttttt
1	FOXG_03660.1	3,201,383	3,200,975	-	0	409	ATCTCTGTTTGTCTGAAGCTTTTAATCTTCCTACACACTCTTTTATTCATTTATATACAG CGAAGCCGGAATCTTCCATCCACTTATTTACGAATGCTCAATGTATTGGATCTTATAAAA CCGTGGGGTTACACCACAAGCGAAACGTAGACCGCATTCACTCTTCGTTCCCGCACATTT GAACTCGGTTTCTTTCCCCTCTTCTTGCTATTCACCTGACATACATTCTTCGAACCCTGC AAAAAGAGCAGTGTGGATGATATAGGTTGACAAAATGGCTGAAGGCGATATGGACTTGGG ACAACTGTCCACTACTCAGCAGGAGGCTCTTGATCAATATACACAAGTGACCAACCAAGA GATCAGCGAAGCTATTCCGCTTCTCCGACGCTCCGAATGGAATGTTCAG
	Intron 1-2	3,200,974	3,200,923			52	gtatcaaactcgctcctttgctcct..........ccatgcttctaacgatgcatcatag
2	FOXG_03660.2	3,200,922	3,199,415	0	-	1,508	ATTGCAATCGCCAAGTTCTTCGACGGCGAAGTTGCAGACCCAGTAGCTGCAGCACAACAA GAAATACCCCGAGCGACAGCGCGGCACGAAAACCTACAAGAGAGCCTTTTTGATGAGGCA ATTCGTGCCCCTCGAGCTTCACCACGACAGCGCACCGATCTAGCTCCAAGAATCGTGCCT CAGAACCCTGTCACAAATCGAACACCATGGTTGCTGGGTCTGCTCCTCACACCCTTTAGC TTAGGCTGGAGAGCTGCCTCGACTCTATTTCGGACTTTGATCTATGCGCTGTCTTTCTTG CCCGCCTCGATTCGGCCACGGGCTGTTACGAGCAGAATCTCGACAGGCTTCAGAGGCACC AATGGTCGCCGACCTCTCATGCCTCGAGACACCGCCTCGAGATTCAAGCGAGAGTTCGAA GAGGAGTATGGAGAGAACGAATTGCCCTTTTTCGAGGGCGGTGTCGCTCAGGCGCATGAT CAAGCCAAGAAGGACCTCAAGTTTATGCTTGTGGTATTGATGTCGCCTGAGCACGATGAT ACCGAGTCTTTCGTAAAAGAGACTTTACTAGCACCAGAAGTGGTGAACTTCATAAAAGAT CCTTCCAACAACATAATTCTGTGGGGCGGAAACGTCCTGGATTCCGAGGCATATCAGGTG GCTCAGGAGTATATCTGCACCAAGTTTCCCTTCTCGGCATTGGTTTGCCTTACACCGAAG GAGGGCAGTACACGAATGGGGATCGTCAAGCGACTAGTTGGACCCATGCCTCCCTCCACT TACCTATCAGAGCTTCGAGCAGCTATCGAGAAGTACGGTGCAGATCTCGATGGAGTACGC GCAGAGCGAACAGCCCAGGAAGTAACGAGAAATCTACGAACTGAGCAAGACTCGGCCTAC GAACGGTCGCTAGCTATTGACCGAGAACGCGCACGCCAGAAGAGAGAAGCAGCAGCGGCC GCAGCAGCAGCAGAGAAGCGCGCGCAGGAAGAAGCAGAGGCAGCAAAGAGACTCGAAGAA AAGCGCGAGCAATGGATTGCTTGGAGAGCTACAACTATTGTGCCCGAGCCACCAACCAGC GATAAGAGCGTGGTACGAGTTGCACTCAAGATGCCCGAGGAATCGGGTATCGGCCGAATT GTGCGGCGGTTCCCCCAAGATGCCTCCCTGGAGGACCTGTATGCCTTTGTGGAGTGCTAC AGTGTTCTCAAAGAGGAGGGTGCAGCGGGTGCTGAGAAGCCGGGGGAGTACGAGCACGAA TACAAGTTCCGAATCGCCTCCATTCTCCCCAGAACGGTGTACGAGCCTAGCACAACAGTG ACGATGGGGGAGAAGATTGGACGGTCAGGAAATCTGATTGTGGAGGACATATCACCGGAT TCGGAAGATGAGTCGGACGACGAGGGTGATGACGAAGACTAGGAGGCGGAGGGTGGTCAG TCAGTAGCTAGCGCCAAGAGGTCATGACCAGCGATCGTCTGTTATGGAGACTTTTCATGG CGGTCAAG
	3' downstream sequence						agctgtactgttatataatgaagaatagacacgactttgactacaagagg..........

.