▼

More ▼

Favourite species

All species

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Export data

Share this page

Bookmark this page

Transcript: FOXG_11408T0

Description

conserved hypothetical protein [Source:BROAD_F_oxysporum;Acc:FOXG_11408]

Location

Chromosome 10: 1,340,243-1,342,558 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 31 domains and features.

Gene

This transcript is a product of gene FOXG_11408 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	FOXG_11408T0	2261	679aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D2Y554	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Domains & features

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	179	256	-	cd15761	-
CDD	335	421	-	cd15737	-
Gene3D	591	661	-	4.10.860.20	-
SMART	177	253	FYVE zinc finger	SM00064	IPR000306 [Display all genes with this domain]
Pfam	181	250	FYVE zinc finger	PF01363	IPR000306 [Display all genes with this domain]
SMART	330	426	FYVE zinc finger	SM00064	IPR000306 [Display all genes with this domain]
Pfam	334	424	FYVE zinc finger	PF01363	IPR000306 [Display all genes with this domain]
PANTHER	332	657	Rab4/Rab5 effector domain-containing protein	PTHR13510	IPR052727 [Display all genes with this domain]
Pfam	618	657	Rabenosyn, Rab binding domain	PF11464	IPR021565 [Display all genes with this domain]
Superfamily	613	657	Rabenosyn, Rab binding domain superfamily	SSF140125	IPR036531 [Display all genes with this domain]
SMART	82	107	Rad18, zinc finger UBZ4-type	SM00734	IPR006642 [Display all genes with this domain]
PROSITE profiles	196	252	Zinc finger, FYVE-related	PS50178	IPR017455 [Display all genes with this domain]
PROSITE profiles	338	425	Zinc finger, FYVE-related	PS50178	IPR017455 [Display all genes with this domain]
Superfamily	180	267	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
Superfamily	334	445	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
Gene3D	173	254	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]
Gene3D	324	436	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

Show entries

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
MobiDBLite	1	37
MobiDBLite	564	605
MobiDBLite	584	603
Seg	3	18
Seg	32	58
Seg	285	297
Seg	544	586
Seg	605	621
Alphafold	1	679
Alphafold	1	679
Alphafold	1	679
Ncoils	269	296
Ncoils	602	622
Ncoils	642	669

Personal Data

Transcript: FOXG_11408T0

Domains & features

Domains

Other features

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: FOXG_11408T0

Domains & features

Domains

Other features

About Us

Get help

Our sister sites

Follow us