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    Transcript: FOXG_04342T0

    Description

    conserved hypothetical protein [Source:BROAD_F_oxysporum;Acc:FOXG_04342]

    Location

    Chromosome 4: 4,215,643-4,218,700 forward strand.

    About this transcript

    This transcript has 4 exons, is annotated with 46 domains and features and is associated with 1 variant allele.

    Gene

    This transcript is a product of gene FOXG_04342 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtFlags
    -FOXG_04342T02581740aa
     
    Protein coding
    		A0A0D2XK72 Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    PANTHER46738-PTHR19879-
    CDD366641-cd00200-
    PROSITE profiles478509-PS50294-
    PROSITE profiles564600-PS50294-
    PROSITE profiles607641-PS50294-
    Prints455469G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints497511G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints626640G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    PROSITE profiles4678LIS1 homology motifPS50896IPR006594 [Display all genes with this domain]
    SMART4678LIS1 homology motifSM00667IPR006594 [Display all genes with this domain]
    Pfam4874LIS1 homology motifPF08513IPR006594 [Display all genes with this domain]
    Pfam91212TFIID subunit TAF5, NTD2 domainPF04494IPR007582 [Display all genes with this domain]
    CDD92218TFIID subunit TAF5, NTD2 domaincd08044IPR007582 [Display all genes with this domain]
    Superfamily80216TFIID subunit TAF5, NTD2 domain superfamilySSF160897IPR037264 [Display all genes with this domain]
    Gene3D89219TFIID subunit TAF5, NTD2 domain superfamily1.25.40.500IPR037264 [Display all genes with this domain]
    SMART343391WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam366391WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles366393WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART407468WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles454471WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART471510WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam473509WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles478509WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART513554WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam516554WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles520563WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART557596WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam558596WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles564605WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART599639WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam603639WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles614641WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    PROSITE patterns626640WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    Superfamily366642WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D359512WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D513735WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    MobiDBLite146
    MobiDBLite2746
    MobiDBLite643700
    MobiDBLite645693
    Seg244
    Seg287297
    Seg466477
    Seg654671
    Seg679700
    Alphafold1740

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