Cryptococcus neoformans var. neoformans JEC21 (ASM9104v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
ER-associated protein catabolism-related protein, putative
Chromosome 3: 679,081-681,692 forward strand.
This transcript has 7 exons and is annotated with 13 domains and features.
This transcript is a product of gene CNC02370 Show transcript tableHide transcript table
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| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........tcgctgacgtatgtatataatccgcgttgctatttatctctcgactatga
| ||||||
| 1 | AAW42211-1 | 679,081 | 679,110 | 0 | 0 | 30 |
CTACCGGCCTCTTCCAAAACCCAGACCATG
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| Intron 1-2 | 679,111 | 679,153 | 43 |
gtaagcccctgcctccctgcgcggccagcgctgatcgccgcag
| |||
| 2 | AAW42211-2 | 679,154 | 679,371 | 0 | 2 | 218 |
CTGCTCCGGATCCGCTCGCCCGCGGGGACTGCCCGCCTCACTGTGCAGCCCGAGACGACG GGGGAGGACTTTGCGGAGGCGATCCTCAACACGATCCCCGCCGCAGACCCCCAGCCAGAC CCCGCCACGCTCGCACTCAGCAACCAGCCGGGCGCCGCGGGGGAGTCCGTCCCCTTCCAC GCCCTCAGCGGCCGCACAGTCGGCGACATGGGTTTCAG |
| Intron 2-3 | 679,372 | 679,414 | 43 |
gtacgcccctttgttccagccggcgactcgctgacccccgcag
| |||
| 3 | AAW42211-3 | 679,415 | 679,712 | 2 | 0 | 298 |
CCATGGGGATCTCCTGTTCCTCTCGTACAAGCCACGTGCTGCCGACCCCGACTCGCACCC GGCCATGCAGGCCACAGCGCCGCACCCCCAGCCCGCGCAGCCGGACCCCTCCCACCCAAA GACACACACCGATCCGCCCATGCCAAACACCATCCCGCTCAGAGACCTGTCTTCCGTGCA AGAGCCCGAGATTGATCAGTACTGGGAGAAGCAGACGGGCAAGATTGAGCGGAAGAGGGA TCCTGCATTCTGTAGGCACGGCGACAAGGCCATGTGTGATTACTGCATGCCGCTAGAG |
| Intron 3-4 | 679,713 | 679,760 | 48 |
gtatatcgccgtcctctacgtgttctgccgccgctgacgaaaccctag
| |||
| 4 | AAW42211-4 | 679,761 | 680,702 | 0 | 0 | 942 |
CCGTACGACCCCAAGTTCCAGTCTGAGCATCAGATCAAGCACCTGTCCTACCATGCATAT CTTCGCAAGCTCCTCTCCTCCCGTCCACCCACCGCTTCATCAGCTACCGATCTTCCTCCG CTCTCGCCCACATCTCTATCCGTCATCACACCTTGCCCTACAGGGGCGCACCCTTCATTT CCCGACGGTATCTGCTCCACATGCCAGCCTTCTGCGGTAACCCTCCAATCCCAGCCGTTC AGAATGGTCGACCACATTGAATTCGCTTCGCCGTCCATCATCGAAGGCCTCCTCTCCGCA TGGCGTCGTACAGGGACCCAACGGATCGCTTTCCTCATCGGACGAGAAGACAAATATGAA AAGGTCCCAATGGGCATCAAGGTCATCGTCGAAGCTGTGTGGGAGCCAAAGCAGGAAGGC GAACTCGATGGACTGACTGTCGAAACCCCATGGAGCGACGAATCTAGGGTTCAGGAGATT GCGAAATGGTGTGATAAAGGCTTGAGCGTCGTAGGCATGATTTACACTGATCTCACTCCC TCCCCCGACGACATTACTAAAACACTTTACAAACGCCACGCCCAGTCGTACACTGCCTCC TCGCTGGAAATGCTCCTTTCCGCCGCTTATCAGCTCTCCCATCCACTTTCTACCAGAATG TCTCCCACCGGTCATTATTCCTCTCGTTTCGTCACCTGCTGTTTGACGGGTGATAAGGAC GGAGGTGTCGACATCTTGGCATGGCAGGCAAGTGAGCATGCCGAAGCCATGGTGAAGGCT GGAATCGTTGAGGCCAGTGTAGACCCCGCGGTTGTGAGAGTCAGGAAGCCAGGAGAAGGA GAGTATGTCCCGGAAGTGTTTTACAGCTATAAGAATGAGTATGGGCTACAGGTCAAGATG CCTGCAAAGCCCACTTTTCCTGTCGAGTATCTCTACGTCAAT |
| Intron 4-5 | 680,703 | 680,755 | 53 |
gtaggtttttttggtgcacgtgcac..........ttctttacttacgggatgctactag
| |||
| 5 | AAW42211-5 | 680,756 | 681,007 | 0 | 0 | 252 |
ATCACCCATGGTTTCCCCCTCGCGCCATCCCCTCTTTTCCTTTCCAACGCTTTCCCAACA GAAAACCGTCCCGGGCTGCATGATCAATCCATGCAGGTGGTTATCACGCAACTTGCTGCG ATTCTAAAGACTAGCGATGCCGAAATTGGGGATGCCGGCACATGGCCCGGGAGGATCAAG AAGGATGTCGAGAAATGGTTGAGCGATTGGCATCTGGTGACATTCTTATGCATGCAGGGT CTGTTTTCCTTG |
| Intron 5-6 | 681,008 | 681,086 | 79 |
gtaagtaaaaatgcgggacctgggc..........tcttttctttttttttttttggtag
| |||
| 6 | AAW42211-6 | 681,087 | 681,216 | 0 | 1 | 130 |
AAGGAGCAACAGATTCTTTGTCGAGCTGCTACTGCCCATGCCCATCCGAATGATACCCAC GCATTGGAAGAGCTTTTCGCTAGTGGTGGATGGCAGACATTGCTCACCATTGTCGACTCT GAAGCTTCCG |
| Intron 6-7 | 681,217 | 681,305 | 89 |
gtgagttatctggtcgcgcgcatga..........tctccccccccaaaaaaaacaaaag
| |||
| 7 | AAW42211-7 | 681,306 | 681,692 | 1 | 1 | 387 |
CCAATGCTCGTTCCAACCCTCCCCCTACATCATCGTTCAATAACCTCGGGATCGATTCTC CTGCGTTTGCCGGTCCCTCTACCGAGTCGTCTGCACCGCCATCGGGTCCTGATTCAGTTG GGGCAGGAGCAGGGGCAGGGGCAGGTGGTGGTAGGGAGAGGGTTTGTCCCCATTGCACGT TTGTTAATGAGCATGGAGGGAGCGATTGCGAGATTTGTGGATTGCCACTTGACGGTTAAG AACTAGCTCGTAAAAACTGTATCAACTGCTTTTTAGATCGTCTTCTTTTTTTTTTTCGTT GTCAAGGTGGTAGGGATACAGGTTGATTGGGCGTAGCAAGCAGACTGTAAAAATAGACAA AAATGCATTACAGAAAGAAAAAGTTGG |
| 3' downstream sequence |
cattcaaagagaatttcccattctcgtaaaagtctgcagagtctgcaaat..........
|
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Ensembl Fungi release 60 - October 2024 © EMBL-EBI EMBL-EBI
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