Cryptococcus neoformans var. neoformans JEC21 (ASM9104v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
splicing factor Prp8, putative
Chromosome 1: 359,633-368,152 forward strand.
This transcript has 15 exons and is annotated with 35 domains and features.
This transcript is a product of gene CNA01350 Show transcript tableHide transcript table
.
| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........tgctcctggctgcttcatatgccatctcagatacatctcgccacatctac
| ||||||
| 1 | AAW40776-1 | 359,633 | 359,891 | 0 | 0 | 259 |
TTTTTGTATAAAACCTTCCTTCCTCAAAACCCCAACGCGCCGCATCATGTCCACCGTTCC GCCAGGATTCGGTGCGCCGCCCCCGGGATTCACCCCTCAGCCAAACGGAAACGGAGACGG CATGGAGGGAGACTTCTTTGGACAATTAAGCCAGGAGGAGATTGATAAGAAGGCCAGAAA ATGGAGGCAGAGTCAGAAGAGAAGATTTAACTCTAAGAGAAGACAGGGTGGCGGTGGTGG TGTGGATTTTGGCAAGGCT |
| Intron 1-2 | 359,892 | 359,955 | 64 |
gtcagtatcttttgtggaatgtgaa..........aatgtaactgacttttgcaatgtag
| |||
| 2 | AAW40776-2 | 359,956 | 360,111 | 0 | 0 | 156 |
GATCTGCCGCCAGAGCACATCAGAAAAATCATCAAGGATCACGGAGATATGTCAAATAGG AAGTTTAGGAATGACAAGCGAGTGCATTTGGGTGCCTTGAAGTACGTGCCTCATGCGGTC ATGAAGCTTTTGGAGAACATCCCAATGCCCTGGGAA |
| Intron 2-3 | 360,112 | 360,166 | 55 |
gtaagtcacaatcctattttcggcc..........tggctgatgcatatcaccatcacag
| |||
| 3 | AAW40776-3 | 360,167 | 361,947 | 0 | 2 | 1,781 |
CAAGTACGAGAGGTTCCAGTGCTCTACCACATTTCCGGTGCCATCACCTTTGTCAACGAA GTTCCCCGAGTTATTGAACCAGTGTACCACGCTCAGTGGGCTTCTATGTGGCTTGCGATG CGTCGAGAAAAGCGAGATCGACGACACTTTAAGCGAATGCGATTCCCTCCATTTGATGAC GAAGAGCCGCCGATGGATTATGGAGATAATGTATTGGATGTTGAGCCGTTAGAGGCCATT CAGTTGGAATTAGATGAGGAAGACGATGAGGCTATCTTGGAATGGTTCTACGACCCCAAG CCCCTCGTTGACACCCCTCAAGTCAATGGGTCCAGCTACAAATATTTCCAACTCGCTCTT CCTCAGATGGCCAACTTGTACCGAATTGGTAGACAATTGTTGAGCGATTACTCGGACAAC AACGCATTCTATTTGTTCGATAAGAAGAGTTTCTTCACCGCCAAAGCGCTTAACATTGCC TTGCCTGGTGGCCCCAAATTCGAGCCGTTATACCGAGACATGGACGCCTTCGACGAGGAC TGGAACGAATTCAATGATATCAACAAGATTATCATTCGAAACGTCATCCGATCTGAGTAC AAGGTTGCCTTCCCTCATCTCTACAACTCTCTTCCTCGATCCGTCTACATTGGTGTCTAT CACGAGCCCAAGAACGTTTACATCAAGACCGATGACCCCGACCTCCCTGCATTCTACTTT GACCCTCTTATCAACCCCATCTCTCAGCGAGTCGTGCAGGAAGCTCACACTCCTCTCGTC TCCCATGAGGATCAAGTCTTCGGATTTGGTAACGATGAAGATGTTGAGTTCGAGTTGCCC GAGGAGGTAGAGCCATTCTTGGGAGAGAGGGATTTGGAGAATGAGAATACTTCGGACGCC ATCGCGTTGTATTGGGCACCATACCCTTACAATTTGCGAAGTGGCAAAATGAAGCGAGCT CAGGATGTGCCTTTGATCAAGAACCTTTATCTTGAACATTGCCCTGACGGTCAGCCCGTC AAGATTAGAGTTTCTTACCAGAAGCTTCTTAAGGTGTACGTGTTGAACGCTCTCCACAAC AAGCCCCCCAAGGCGATGGTCAAGCGAAACCTTTTCCGAAGTTTGAAGAACACCAAGTTT TTCCAGGCCACCACTCTTGACTGGGTGGAAGCCGGTCTTCAAGTTTGTCGCCAAGGTTAC AACATGCTCAACCTTCTTATCCACCGAAAGAACCTCAATTACCTCCATCTTGATTACAAT CTCAACCTCAAGCCCATTAAGACTCTTACGACCAAGGAGCGAAAGAAGTCTCGATTCGGT AACGCTTTCCACCTTTGCCGAGAAATTCTTCGTCTCACCAAGCTCATTGTTGACGCCCAC GTTCAATTCCGACTCGGTAACGTCGACGCTTTCCAGCTTGCTGATGGTCTTCAGTACATG TTCGCGCACGTCGGTCAATTGACCGGTATGTATCGATACAAGTACAAGCTTATGAAGCAA ATCCGTATGTGCAAGGATCTCAAGCACGTCATCTACTCGAGGTTCAACACTGGCCCTGTT GGTAAGGGTCCTGGTGTCGGTTTCTGGGCGCCCGGATGGAGAGTCTGGTTGTTCTTCATG AGGGGTATTGTCCCTTTGCTTGAAAGATGGTTGGGTAACTTGCTGGCTAGGCAGTTCGAG GGTAGGAACAGTAAGGGTATAGCCAAGACTGTTACCAAGCAAAGAGTGGAGTCTCACTTC GACTTGGAACTCCGTGCTGCCGTTATGCACGATATCTTGGA |
| Intron 3-4 | 361,948 | 361,999 | 52 |
gtgagtgtctttcacctcttaacag..........acgggttgtatctaacacgatgcag
| |||
| 4 | AAW40776-4 | 362,000 | 362,643 | 2 | 1 | 644 |
TATGATGCCTGAAGGTGTCAAACAAAACAAGGCCAAGACCATTCTCCAACATCTTTCCGA AGCTTGGCGATGCTGGAAAGCTAATATCCCTTGGAAGGTCCCTGGTATGCCCGCTGCCAT TGAAAACATCATTCTTCGATACGTCAAATCCAAGGCCGATTGGTGGACGTCTGTTGCCCA CTACAACCGAGAACGTATCAGGCGAGGCGCTACTGTCGACAAGGCTGTCGTTCGTAAGAA CCTTGGTCGATTGACGAGATTGTACCTCAAGGCTGAGCAGGAGAGGCAGAACGGTTATCT AAAGGACGGTCCTTACATCACTTCCGAAGAGGGTACCGCTATCCTTATCTCTACTGCTCA CTGGTTTGAATCTCGGAAGTTTGCTCCTATCCCCTTCCCTCCACTTTCTTACAAGCACGA CACCAAGCTTCTCGTTCTTGCCCTTGAAAAGCTCAAGGAAGCGTACAGCGTCCACGGTCG ACTTAATCAGTCTCAACGAGAAGAGTTGGCGCTGGTTGAGCAGGCATATGATAACCCGCA CGAGTGTTTGTCGCGTATCAAGAGGTTATTACTGACTCAACGAGCGTTCAAGGAAGCTGG TATTGAGTTCTTTGACACTTATGACAAGTTGATCCCTTGTTATG |
| Intron 4-5 | 362,644 | 362,692 | 49 |
gtgtgttcattttcatttgcctgcgatttgaatgctgataagttcatag
| |||
| 5 | AAW40776-5 | 362,693 | 362,787 | 1 | 0 | 95 |
ACGTTGAGCCTCTCGAAAAACTCAGTGACGCGTATCTTGACCAGTTCTTGTGGTATGAGG CCGATAAGAGAAGGCTTTTCCCTAGTTGGGTCAAG |
| Intron 5-6 | 362,788 | 362,838 | 51 |
gtaagaagacttgcgattattcgtg..........aactttcgctgacatttcgatctag
| |||
| 6 | AAW40776-6 | 362,839 | 363,059 | 0 | 2 | 221 |
CCCTCCGATTCTGAGCCCCCTCCCCTCCTCGTTTACAAATGGTGTCAGGGTATTAACAAC TTGACCGATATTTGGGACACTTCTGAAGGCGAATCGGTCGTGATGATGGAGACAGTGTTG GCAAGAGTGTATGAGAAGGTTGACTTGACTCTTCTCAGTCGATTGTTGCGTCTTATCATG GACCACAATTTGGCTGATTACATCACTTCAAAGAACAACAC |
| Intron 6-7 | 363,060 | 363,113 | 54 |
gtaaattctaatttttgccttgaag..........tattttactgatagacgtcttttag
| |||
| 7 | AAW40776-7 | 363,114 | 364,266 | 2 | 0 | 1,153 |
TACTCTTACCTTCAAGGATATGTCCCACATCAACACCTACGGTATGATTCGAGGTCTCCA GTTCTCCTCATTCGTCTTCCAGTACTACGGTCTCGTCCTTGATCTTCTCATCCTTGGTCT TGAGCGAGCCAGTGAAATCGCCGGTCTTCCTGAAGCACCCAACGGTTTCCTTCAGTTCAA GAATCGAGAGATCGAGACCAAACACCCCATCCGTTTCTACTCTCGATACGTCGACCGTAT CCATATGCTGTTCCGATTCACCGCTGAGGAGTCTCGAGACCTTATCCAGCGATATCTCAG TGTTCAGCCGGATCCTAACAACGAAAACGTCATCGGTTATAACAACAAGCGGTGCTGGCC CCGAGATTGTCGAATGAGGCTTATCAAGCATGATGTAAACCTTGGTCGTGCAGTCTTCTG GAATGTCAAGAACTCTTTGCCTAGGTCTCTCACTACCATCGAGTGGGAAGACACATTTGT CTCTGTCTACTCCAAGGATAACCCTCAGCTCTTGTTTTCCATGTGCGGTTTCGAAGTCCG AATCCTTCCCCGAGTCCGTACACAGCACGGCGAGGCTTACTCTTTGAAAGACGGCGTTTG GAATCTTACTCAAGAGTCTACCAAAGAACGAACTGCCCAGGCGTTTTTGCGTGTCTCTGA CCAGGGTATTCAAGATTTCAACAACCGTATCCGACAGATTCTCATGAGCTCTGGTAGTGC CACTTTTGCGAAGATCATCAATAAGTGGAACACCTGTCTTATTGGTTTGATGACTTATTA CCGAGAGGCCGTCGTGCACACCAACGAGTTGCTTGATTCTCTTGTCAAGGCCGAAAACAA GGTCCAGACTCGTGTCAAGATTGGTCTTAACTCTAAGATGCCTTCTCGTTTCCCGCCCTG TGTCTTTTACTCCCCTAAGGAACTTGGTGGTCTCGGTATGCTTTCCATGGGCTTCGTACT CATTCCTCAGTCCGATTTGAGGTGGTCCAAGCAGACCGACAGTGGTGGAATTACTCACTT CCGCTCTGGTATGACCCACGAGGAGGACCAATTGATTCCTAACTTGTACCGATACTTGCA ACCTTGGGAAGCGGAGTTCCTGGACTCTGCCAGAGTGTGGTCTGAATACGCTTTGAAGAG GAAGGAAGCTACC |
| Intron 7-8 | 364,267 | 364,315 | 49 |
gtgagttaggattcgatggaactatgttgtacaagctgacggtatccag
| |||
| 8 | AAW40776-8 | 364,316 | 364,467 | 0 | 2 | 152 |
GCTTCTAACCGTCGACTCACCCTTGAAGATCTCGAAGACAGTTGGGACCGAGGTATTCCT AGGATTAACACCCTTTTCCAGAAGGACAGGCACACTCTTGCTTACGACAAGGGATGGCGA GTTCGTCAATACTTCAGTCAATTCTTCCGACT |
| Intron 8-9 | 364,468 | 364,521 | 54 |
gtaagtcaattcttcactatcacag..........aatgtgctcatggttttattcatag
| |||
| 9 | AAW40776-9 | 364,522 | 365,229 | 2 | 2 | 708 |
CCGTAATCAACCATTCATCTGGACTAACCAGCGGCATGATGGTAAACTCTGGCAACTTAA TAACTACCGGGTTGATGTCATCTCTGCTCTCGGTGGTGTTGAGGGTATCTTGGAGCACTC CTTGTTCAAGGGAACTGCCTTCCCAACCTGGGAGGGTCTGTTCTGGGAGAAAGCCTGTCT GCAGAATGGTACTCGTCTTCTCCGTGCCGATGGCTCTGAGGTCCTTGTGGAAGATGTTCA GGAGGGCGATCAACTTCTTGGTCCCGATGGAACGAGCAGGACGGCGAGCAAGATTGTTCG CGGCGAAGAGCGTCTCTACCGTATCAAAACCCATGAGGGGCTCGAAGATCTTGTCTGTAC CCATAACCACATCCTTTCTATGTATAAAGAAAGGTCTGGTTCGGAGCGAGCCCATTCTCC TAGTGCCGACCTCAGCCTCACAGACAGCCATGAGAGAGTCGATGTGACTGTCGATGACTT TGTCCGCCTTCCTCAACAAGAGCAACAGAAGTATCAGCTTTTCCGTTCAACTGCTTCTGT GCGACACGAGCGACCATCCACTTCTAAATTAGACACCACCTTGTTACGCATCAATTCTAT CGAGCTTGAGGACGAGCCTACGAAGTGGTCCGGTTTTGTGGTTGACAAAGACAGTCTTTA TCTTCGTCATGACTATTTGGTATTGCACAACTCAGGCTTTGAGGAGTC |
| Intron 9-10 | 365,230 | 365,281 | 52 |
gtgagttcaaatactcctattcgcc..........agaagaagctgacatggtgttttag
| |||
| 10 | AAW40776-10 | 365,282 | 365,496 | 2 | 1 | 215 |
CATGAAAAACAAGCGACTGACCAACGCCCAACGTTCCGGTCTTTCTCAGATTCCTAATCG TCGATTCACCATGTGGTGGTCTCCTACCATCAACAGAGCCAATGTCTACGTTGGTTTCCA AGTCCAGCTCGATTTGACTGGTGTTTTCATGCACGGTAAGATCCCCACTTTGAAGATCTC TTTGATTCAAATCTTCCGAGCGCACTTATGGCAGA |
| Intron 10-11 | 365,497 | 365,552 | 56 |
gtaagttgttgaaattgaagtcgtt..........tcccgatccctaatgtcttttgcag
| |||
| 11 | AAW40776-11 | 365,553 | 365,602 | 1 | 0 | 50 |
AGATCCACGAGTCGGTTGTTATGGATTTGTGTCAAGTCTTCGATCAAGAG
|
| Intron 11-12 | 365,603 | 365,652 | 50 |
gtgtgtaacgtctgattctacaaattcgtagttgtgctgactccgtacag
| |||
| 12 | AAW40776-12 | 365,653 | 366,573 | 0 | 0 | 921 |
ATGGAGGCACTCCAAATCGAGACTGTTCAGAAAGAGACTATCCACCCGCGAAAGTCGTAC AAGATGAACTCTTCGGCTTCCGACATTCTCCTTTTCTCGTCTTACAAGTGGCAGATCTCT CGCCCTTCCCTGCTTACTGATAACCGGGACACTATGGATGGCACTACCTCCAACAAGTTC TGGCTCGACATCCAGCTCCGATGGGGTGACTTTGACTCTCATGACATCGAGCGTTACGCC CGTGCGAAGTACCTCGACTATTCTTCGGACAGTCAGTCTATCTACCCATCGCCCACTGGT AATCTTATCGCGATTGACTTGGCATACAACCTCTATTCGGCGTACGGCTGTTACTTCCCC GGTCTCAAGCCACTCCTCCAGCAAGCGATGGCGAAGATCATGAAGGCCAACCCCGCTTTG TATGTTTTACGTGAGCGTATAAGGAAGGGTCTTCAGCTCTACTCATCTGAGCCTACTGAA CCTTATCTTAACTCTTCCAACTACTCCGAGTTGTTCTCAAACCAGATTATCTGGTTCGTA GACGACACTAATGTCTACCGAGTCACAGTTCACAAGACTTTTGAAGGTAACTTGACTACC AAGCCCATCAACGGTGCTATTTTCATCTTCAATCCTCGTACTGGTCAACTCTTCTTAAAG ATCATTCACACCTCGGTTTGGGCTGGTCAGAAGCGTCTAGGTCAATTGGCCAAATGGAAG ACGGCCGAAGAAGTCGCTGCTTTGGTTCGATCATTGCCCGTGGAAGAACAACCTAAACAA GTCATTGTTACTCGAAAGGGTATGCTTGACCCCTTGGAAGTCCATTTGCTTGATTTCCCC AACATCGTTATCAAGGGTTCCGAACTCCAGTTACCATTCCAAGCGACTCTCAAGATGGAG AAATTTGGTGACTTAATCCTG |
| Intron 12-13 | 366,574 | 366,621 | 48 |
gtacgtccaatcaacccgcgagaaaaaaataagctgatcatgtaacag
| |||
| 13 | AAW40776-13 | 366,622 | 366,796 | 0 | 1 | 175 |
CGTGCAACTCAACCCCAAATGGTTTTGTTCAATCTTTATGACGATTGGCTCAAGTCTATC TCAAGTTACACTGCCTTCTCTCGTCTTATTCTTATCCTTCGTGCTTTGCACGTCAACAAC GAGAAGTCTAAGATTATTTTGAGACCTGACAAGAATACTATCACAGAGTCTTACC |
| Intron 13-14 | 366,797 | 366,846 | 50 |
gtaagcatttttttatttccgctaatagtattgactgacccatttcccag
| |||
| 14 | AAW40776-14 | 366,847 | 367,892 | 1 | 0 | 1,046 |
ACATTTGGCCATCGCTCAGTGACGACGAGTGGATGAAGGTTGAAGTGGCTCTCAAGGATC TCATTTTGGCCGACTTTGGTAAGAGGAACAGCGTCAACGTAGCCTCCCTCACAGCCAGCG AAATTCGAGACATCATTCTGGGTATGGAGATTGCAGCGCCATCCGTTCAACGACAACAGA TGGCTGAGATCGAAAAGAACACCGAGGCTGCCGCTCAGGTTACTGCTCTTCAGACCAAAA CTACCAACATCCATGGTGACGAGATCGTCGTCACGACAACTACCCAGTACGAACAGCAAA CCTTTGCTAGTAAGTCTGACTGGCGTGTACGAGCTATCAGTGCCACCAATTTGCCACTCC GTGTCAACCACATCTTTGTCGGCAATGATGATGTGAAGGACGATGCTGGCAGCTACACAT ACGTTATTCCCAAGAACGTCTTACGAAGCTTCATTGTCAACGCCGATCTCCGTACACAGG TCGTTGCCTACCTTTATGGTACTTCACCCCCTGACAACAAGCAGGTTAAGGAGATCAAGG CCGTCGCTTGGATCCCTCAGAGGGGTACCAACAACGGTGTAGATCTTCCTGTTACCTTAC CTAAGCATGACTTCCTTCTCAAGGATCTTGAGCCCCTTGGTTGGATTAAGACACAGTCAC AAGAACTCAACCACCTTTCTCCTCAGGACGTTACTACCCAAGCGAAAATTATGGCAGCTC ACCCTGAGTGGGGACCTCAATCCATTTGCGTCACCTGTTCTTTCACTCCTGGTTCCGTCT CTCTCAACGCATGGGACCTCACAGTGGCTGGCTTCGAATGGGGTAGGAAGAACGAGGATG TCACGGGCCAGAACCCTGGGTTCAACCCGTCCATGGCCAACCGAGTTCAATTATTGTTGT CTGACAGGATTTTGGGTATGACCTTAGTTCCTGAGGGTGGGATTTGGAACTATGGTGTTG GTTTAACTCAGAGCTGGTCAGAAAAGATTCCTTACACAATGACTCTTGACAAGCCTGAGG CGTTCTGGGCCCCTTGCCACCGACCT |
| Intron 14-15 | 367,893 | 367,951 | 59 |
gtaagttcaatctattgtctgtttg..........tcttattgatgtattctttttatag
| |||
| 15 | AAW40776-15 | 367,952 | 368,152 | 0 | 0 | 201 |
AACGCTTTCCTCAACTTTGCCTCCATGGAGGGGGATGATGCGGCTGACGTTGAGAATAGT TTGGAGTAAATGTTTCGTTATGAGGAATAGGAAGTCTCTTGGAGTACCCGTAAAGATCTG GTTGATTTGGTCAGTAGTACCTGTTTGTATACTAGTAGATATCCGTTTCAGTACAAAGAT TCAATGCACTTTTGACTCCGA |
| 3' downstream sequence |
tcagaggcagtttgtcatcttctttcactaatccggcagctcactagcag..........
|
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Ensembl Fungi release 60 - October 2024 © EMBL-EBI EMBL-EBI
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