▼

Favourite species

All species

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: EED46838

.

Description

vacuolar protein sorting protein DigA

Location

SuperContig EQ963483: 286,612-289,620 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 13 domains and features.

Gene

This transcript is a product of gene AFLA_048910 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EED46838	2877	958aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8NRI6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	23	950	-	PTHR23323	-
CDD	856	936	-	cd16462	-
PROSITE profiles	615	772	Clathrin, heavy chain/VPS, 7-fold repeat	PS50236	IPR000547 [Display all genes with this domain]
Pfam	23	385	Pep3/Vps18/deep orange, beta-propeller domain	PF05131	IPR007810 [Display all genes with this domain]

Other features

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
Seg	213	224
Seg	669	685
Seg	794	808
Alphafold	1	958
Alphafold	1	958
Alphafold	1	958
Alphafold	1	958
Ncoils	807	841
Ncoils	958	958

.

Personal Data