Gaeumannomyces tritici R3-111a-1 Assembly and Gene Annotation
[]{#about}
About the Gaeumannomyces graminis genome
The take-all fungus, Gaeumannomyces graminis (ascomycota), is a major
root-rot pathogen of cereals and grasses. All varieties of wheat and
barley are susceptible. It is an important disease in winter wheat
particularly, and is favoured by conditions of intensive production and
monoculture. It survives in the soil on infected residues of one crop,
then invades the roots of the following crop, progressively destroying
the root system. In exceptional cases it can kill the whole crop; hence
the name
"take-all
".
Picture credit: Richard Gutteridge - Rothamsted Research
The Broad Institute in collaboration with The Center for Integrated Fungal Research (CIFR), North Carolina State University is sequencing the Gaeumannomyces graminis var. tritici strain R3-111a-1 using whole genome shotgun (WGS) sequencing.
Statistics
Summary
Assembly | Gae_graminis_V2, INSDC Assembly GCA_000145635.1, Aug 2012 |
Database version | 113.1 |
Golden Path Length | 43,768,664 |
Genebuild by | |
Genebuild method | Import |
Data source | European Nucleotide Archive |
Gene counts
Coding genes | 14,458 |
Non coding genes | 211 |
Small non coding genes | 211 |
Pseudogenes | 75 |
Gene transcripts | 14,936 |