Coccidioides posadasii str. Silveira (CPS2)

Coccidioides posadasii str. Silveira Assembly and Gene Annotation

About Coccidioides posadasii str. Silveira (GCA_000170175)

Coccidioides posadasii is a pathogenic fungus that, along with Coccidioides immitis, is the causative agent of coccidioidomycosis, or valley fever in humans. It resides in the soil in certain parts of the Southwestern United States, northern Mexico, and some other areas in the Americas, but its evolution was connected to its animal hosts.

C. posadasii and C. immitis are morphologically identical, but genetically and epidemiologically distinct. C. posadasii was identified as a separate species other than C. immitis in 2002 after a phylogenetic analysis. The two species can be distinguished by DNA polymorphisms and different rates of growth in the presence of high salt concentrations: C. posadasii grows more slowly. It also differs epidemiologically, since it is found outside the San Joaquin Valley. Unlike C. immitis, which is geographically largely limited to California, C. posadasii can also be found in northern Mexico and South America.

(Text from Wikipedia, the free encyclopaedia.)

Assembly

The assembly presented is the CPS2 assembly submitted to INSDC with the assembly accession GCA_000170175.2.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000170175.2, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyCPS2, INSDC Assembly GCA_000170175.2,
Database version111.1
Golden Path Length27,583,241
Genebuild byCoccidioides Genome Resources Consortium; The Broad Institute Genome Sequencing Platform
Genebuild methodImport
Data sourceCoccidioides Genome Resources Consortium; The Broad Institute Genome Sequencing Platform

Gene counts

Coding genes10,225
Non coding genes340
Small non coding genes338
Long non coding genes2
Pseudogenes2
Gene transcripts10,570