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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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Transcript: CAG78029 YALI0_F09790g-1

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Description

YALI0F09790p

Location

Chromosome F: 1,337,153-1,337,605 forward strand.

About this transcript

This transcript has 1 exon and is annotated with 20 domains and features.

Gene

This transcript is a product of gene YALI0_F09790g Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
YALI0_F09790g-1	CAG78029	453	150aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6C290	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	1	76	-	cd01803	-
Gene3D	1	79	-	3.10.20.90	-
Pfam	102	147	Ribosomal protein S27a	PF01599	IPR002906 [Display all genes with this domain]
SMART	102	147	Ribosomal protein S27a	SM01402	IPR002906 [Display all genes with this domain]
Gene3D	80	150	S27a-like superfamily	6.20.50.150	IPR038582 [Display all genes with this domain]
PANTHER	1	99	Ubiquitin and ubiquitin-like	PTHR10666	IPR050158 [Display all genes with this domain]
PROSITE patterns	27	52	Ubiquitin conserved site	PS00299	IPR019954 [Display all genes with this domain]
Prints	11	31	Ubiquitin domain	PR00348	IPR019956 [Display all genes with this domain]
Prints	32	52	Ubiquitin domain	PR00348	IPR019956 [Display all genes with this domain]
Prints	53	74	Ubiquitin domain	PR00348	IPR019956 [Display all genes with this domain]
SMART	1	72	Ubiquitin-like domain	SM00213	IPR000626 [Display all genes with this domain]
PROSITE profiles	1	76	Ubiquitin-like domain	PS50053	IPR000626 [Display all genes with this domain]
Pfam	3	74	Ubiquitin-like domain	PF00240	IPR000626 [Display all genes with this domain]
Superfamily	1	93	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]
Superfamily	100	148	Zinc-binding ribosomal protein	SSF57829	IPR011332 [Display all genes with this domain]

Other features

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Feature type	Start	End
Seg	69	84
Seg	89	99
Seg	115	126
Alphafold	1	150
Alphafold	1	150

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