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    Yarrowia lipolytica (GCA_000002525.1) ▼

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    Transcript: CAG79685 YALI0_E18117g-1

    Description

    YALI0E18117p

    Location

    Chromosome E: 2,137,205-2,140,403 reverse strand.

    About this transcript

    This transcript has 2 exons and is annotated with 47 domains and features.

    Gene

    This transcript is a product of gene YALI0_E18117g Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    YALI0_E18117g-1CAG796852565854aa
     
    Protein coding
    		Q6C5H0 -Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    Superfamily3128-SSF49562-
    CDD6128-cd08382-
    Gene3D241295-2.20.70.10-
    Gene3D368407-2.20.70.10-
    Gene3D433733-3.90.1750.10-
    Gene3D623700-3.30.2160.10-
    Gene3D735854-3.30.2410.10-
    PROSITE profiles1106C2 domainPS50004IPR000008 [Display all genes with this domain]
    Pfam697C2 domainPF00168IPR000008 [Display all genes with this domain]
    SMART6104C2 domainSM00239IPR000008 [Display all genes with this domain]
    Gene3D3130C2 domain superfamily2.60.40.150IPR035892 [Display all genes with this domain]
    PANTHER137853E3 ubiquitin-protein ligasePTHR11254IPR050409 [Display all genes with this domain]
    PIRSF1854E3 ubiquitin-protein ligase, SMURF1 typePIRSF001569IPR024928 [Display all genes with this domain]
    CDD500852HECT domaincd00078IPR000569 [Display all genes with this domain]
    SMART519854HECT domainSM00119IPR000569 [Display all genes with this domain]
    PROSITE profiles521854HECT domainPS50237IPR000569 [Display all genes with this domain]
    Pfam551852HECT domainPF00632IPR000569 [Display all genes with this domain]
    Superfamily481847HECT, E3 ligase catalytic domainSSF56204IPR035983 [Display all genes with this domain]
    PROSITE profiles243276WW domainPS50020IPR001202 [Display all genes with this domain]
    SMART244276WW domainSM00456IPR001202 [Display all genes with this domain]
    Pfam245274WW domainPF00397IPR001202 [Display all genes with this domain]
    CDD246274WW domaincd00201IPR001202 [Display all genes with this domain]
    PROSITE patterns249274WW domainPS01159IPR001202 [Display all genes with this domain]
    PROSITE profiles370403WW domainPS50020IPR001202 [Display all genes with this domain]
    SMART371403WW domainSM00456IPR001202 [Display all genes with this domain]
    Pfam372401WW domainPF00397IPR001202 [Display all genes with this domain]
    CDD373402WW domaincd00201IPR001202 [Display all genes with this domain]
    PROSITE patterns376401WW domainPS01159IPR001202 [Display all genes with this domain]
    PROSITE profiles432465WW domainPS50020IPR001202 [Display all genes with this domain]
    SMART433465WW domainSM00456IPR001202 [Display all genes with this domain]
    Pfam434463WW domainPF00397IPR001202 [Display all genes with this domain]
    CDD435465WW domaincd00201IPR001202 [Display all genes with this domain]
    PROSITE patterns438463WW domainPS01159IPR001202 [Display all genes with this domain]
    Superfamily238275WW domain superfamilySSF51045IPR036020 [Display all genes with this domain]
    Superfamily365406WW domain superfamilySSF51045IPR036020 [Display all genes with this domain]
    Superfamily425467WW domain superfamilySSF51045IPR036020 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    MobiDBLite168238
    MobiDBLite168240
    MobiDBLite267297
    MobiDBLite267331
    MobiDBLite305328
    Seg131159
    Seg165232
    Seg319349
    Seg411422
    Alphafold1854
    Ncoils276296

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