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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EGY18993

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Description

UBX domain-containing protein

Location

SuperContig DS572719: 295,153-296,504 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 20 domains and features.

Gene

This transcript is a product of gene VDAG_09327 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EGY18993	1251	416aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G2XGP5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	8	401	-	PTHR23333	-
Pfam	11	51	-	PF14555	-
CDD	18	46	-	cd14273	-
Gene3D	284	403	-	3.10.20.90	-
Superfamily	214	305	NSFL1 cofactor p47, SEP domain superfamily	SSF102848	IPR036241 [Display all genes with this domain]
Gene3D	220	281	NSFL1 cofactor p47, SEP domain superfamily	3.30.420.210	IPR036241 [Display all genes with this domain]
SMART	216	309	SEP domain	SM00553	IPR012989 [Display all genes with this domain]
PROSITE profiles	219	283	SEP domain	PS51399	IPR012989 [Display all genes with this domain]
Pfam	224	297	SEP domain	PF08059	IPR012989 [Display all genes with this domain]
PROSITE profiles	335	390	UBX domain	PS50033	IPR001012 [Display all genes with this domain]
Pfam	338	395	UBX domain	PF00789	IPR001012 [Display all genes with this domain]
Superfamily	292	401	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	45	223
MobiDBLite	304	336
Seg	99	106
Seg	109	121
Seg	160	178
Seg	309	332
Alphafold	1	416
Alphafold	1	416

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