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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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Transcript: CAZ80561 GSTUM_00004695001/CAZ80561

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Location

SuperContig FN430031: 968,911-970,466 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene GSTUM_00004695001 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
GSTUM_00004695001/CAZ80561	CAZ80561	1329	442aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5G7R8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PROSITE profiles	285	440	La protein, xRRM domain	PS51939	IPR014886 [Display all genes with this domain]
Pfam	285	413	La-related protein 7 homolog, xRRM domain	PF19977	IPR045537 [Display all genes with this domain]
Gene3D	273	425	Nucleotide-binding alpha-beta plait domain superfamily	3.30.70.330	IPR012677 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	1	31
MobiDBLite	8	31
MobiDBLite	367	388
MobiDBLite	367	389
MobiDBLite	416	442
Seg	6	17
Seg	414	424
Alphafold	1	442

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