Trichophyton tonsurans CBS 112818 Assembly and Gene Annotation
About Trichophyton tonsurans CBS 112818 (GCA_000151455)
Trichophyton tonsurans is a fungus in the family Arthrodermataceae
that causes ringworm infection of the scalp. It was first recognized by
David Gruby in 1844. Isolates are characterized as the
"--
" or
negative mating type of the Arthroderma vanbreuseghemii complex. This
species is thought to be conspecific with T. equinum, although the
latter represents the
"+
" mating strain of the same biological species
Despite their biological conspecificity, clones of the two mating types
appear to have undergone evolutionary divergence with isolates of the
T. tonsurans-type consistently associated with Tinea capitis
(particularly in children) whereas the T. equinum-type, as its name
implies, is associated with horses as a regular host. Phylogenetic
relationships were established in isolates from Northern Brazil, through
fingerprinting polymorphic RAPD and M13 markers. There seems to be lower
genomic variability in the T. tonsurans species due to allopatric
divergence. Any phenotypic density is likely due to environmental
factors, not genetic characteristics of the fungus.
(Text from Wikipedia, the free encyclopaedia.)
Assembly
The assembly presented is the ASM15145v1 assembly submitted to INSDC with the assembly accession GCA_000151455.1.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000151455.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | ASM15145v1, INSDC Assembly GCA_000151455.1, |
Database version | 113.1 |
Golden Path Length | 22,988,586 |
Genebuild by | Broad Institute |
Genebuild method | Import |
Data source | Broad Institute |
Gene counts
Coding genes | 8,521 |
Non coding genes | 100 |
Small non coding genes | 100 |
Pseudogenes | 2 |
Gene transcripts | 8,623 |