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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EHK16572 TRIVIDRAFT_80342/EHK16572

Description

hypothetical protein

Location

SuperContig 90: 711,659-715,044 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 33 domains and features.

Gene

This transcript is a product of gene TRIVIDRAFT_80342 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
TRIVIDRAFT_80342/EHK16572	EHK16572	3186	898aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G9N9F2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Domains & features

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	12	489	-	PTHR20930	-
Superfamily	226	281	-	SSF57850	-
CDD	371	414	-	cd02249	-
Superfamily	372	417	-	SSF57850	-
Superfamily	429	488	-	SSF57850	-
CDD	441	485	-	cd02340	-
Superfamily	497	563	-	SSF57850	-
CDD	505	558	-	cd02340	-
Gene3D	667	798	Immunoglobulin-like fold	2.60.40.10	IPR013783 [Display all genes with this domain]
CDD	671	795	Next to BRCA1, central domain	cd14947	IPR032350 [Display all genes with this domain]
Pfam	682	794	Next to BRCA1, central domain	PF16158	IPR032350 [Display all genes with this domain]
SMART	223	270	Zinc finger, ZZ-type	SM00291	IPR000433 [Display all genes with this domain]
SMART	367	411	Zinc finger, ZZ-type	SM00291	IPR000433 [Display all genes with this domain]
Pfam	372	409	Zinc finger, ZZ-type	PF00569	IPR000433 [Display all genes with this domain]
SMART	437	482	Zinc finger, ZZ-type	SM00291	IPR000433 [Display all genes with this domain]
Pfam	439	480	Zinc finger, ZZ-type	PF00569	IPR000433 [Display all genes with this domain]
SMART	501	551	Zinc finger, ZZ-type	SM00291	IPR000433 [Display all genes with this domain]
PROSITE profiles	507	563	Zinc finger, ZZ-type	PS50135	IPR000433 [Display all genes with this domain]
Gene3D	222	271	Zinc finger, ZZ-type superfamily	3.30.60.90	IPR043145 [Display all genes with this domain]
Gene3D	368	414	Zinc finger, ZZ-type superfamily	3.30.60.90	IPR043145 [Display all genes with this domain]
Gene3D	433	483	Zinc finger, ZZ-type superfamily	3.30.60.90	IPR043145 [Display all genes with this domain]
Gene3D	494	560	Zinc finger, ZZ-type superfamily	3.30.60.90	IPR043145 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	97	154
MobiDBLite	122	140
MobiDBLite	628	648
MobiDBLite	629	648
MobiDBLite	803	898
MobiDBLite	838	854
MobiDBLite	862	886
Seg	313	326
Seg	609	665
Seg	806	819
Alphafold	1	898

Personal Data

Transcript: EHK16572 TRIVIDRAFT_80342/EHK16572

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Transcript: EHK16572 TRIVIDRAFT_80342/EHK16572

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