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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
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- Transcript history
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Transcript: EHK23490 TRIVIDRAFT_132337/EHK23490

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Description

hypothetical protein

Location

SuperContig 5: 860,085-864,025 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene TRIVIDRAFT_132337 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
TRIVIDRAFT_132337/EHK23490	EHK23490	3738	1246aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G9MNN5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	982	1065	Armadillo-type fold	SSF48371	IPR016024 [Display all genes with this domain]
PROSITE profiles	908	1068	Clathrin, heavy chain/VPS, 7-fold repeat	PS50236	IPR000547 [Display all genes with this domain]
SMART	908	1068	Clathrin, heavy chain/VPS, 7-fold repeat	SM00299	IPR000547 [Display all genes with this domain]
Pfam	970	1066	Clathrin, heavy chain/VPS, 7-fold repeat	PF00637	IPR000547 [Display all genes with this domain]
Gene3D	939	1119	Tetratricopeptide-like helical domain superfamily	1.25.40.10	IPR011990 [Display all genes with this domain]
PANTHER	4	1242	Vacuolar protein sorting-associated protein Vps41/Vps8	PTHR12616	IPR045111 [Display all genes with this domain]
Superfamily	60	291	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]

Other features

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Feature type
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End

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Feature type	Start	End
MobiDBLite	1	39
MobiDBLite	1	43
MobiDBLite	439	464
MobiDBLite	439	482
MobiDBLite	465	479
Seg	1	39
Seg	233	246
Seg	341	362
Seg	379	390
Seg	453	464
Seg	556	578
Seg	748	763
Alphafold	1	1246
Ncoils	14	35

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