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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EHK24588 TRIVIDRAFT_114174/EHK24588

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Description

hypothetical protein

Location

SuperContig 4: 1,181,520-1,183,556 reverse strand.

About this transcript

This transcript has 2 exons and is annotated with 33 domains and features.

Gene

This transcript is a product of gene TRIVIDRAFT_114174 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
TRIVIDRAFT_114174/EHK24588	EHK24588	1899	633aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G9MMM0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	5	84	-	SSF57850	-
CDD	129	171	-	cd15545	-
PANTHER	306	610	PHD and RING finger domain-containing protein 1-like	PTHR12618	IPR047157 [Display all genes with this domain]
Superfamily	112	172	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	126	174	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	129	171	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	128	172	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	129	171	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
SMART	7	77	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	7	78	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
Pfam	53	78	Zinc finger, RING-type	PF13639	IPR001841 [Display all genes with this domain]
SMART	129	171	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
Gene3D	1	91	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]
Gene3D	106	180	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	182	206
MobiDBLite	291	404
MobiDBLite	307	336
MobiDBLite	369	404
MobiDBLite	425	462
MobiDBLite	448	462
MobiDBLite	500	569
MobiDBLite	511	548
MobiDBLite	611	633
Seg	121	125
Seg	192	204
Seg	211	224
Seg	244	263
Seg	357	369
Seg	445	480
Seg	503	512
Seg	527	542
Alphafold	1	633
Ncoils	209	229

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