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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EHK25986 TRIVIDRAFT_113067/EHK25986

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Description

hypothetical protein

Location

SuperContig 2: 259,054-262,055 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 34 domains and features.

Gene

This transcript is a product of gene TRIVIDRAFT_113067 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
TRIVIDRAFT_113067/EHK25986	EHK25986	2895	965aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G9MGZ3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	362	627	-	cd18008	-
Superfamily	708	770	-	SSF57850	-
CDD	792	919	-	cd18793	-
SMART	358	571	Helicase superfamily 1/2, ATP-binding domain	SM00487	IPR014001 [Display all genes with this domain]
PROSITE profiles	375	553	Helicase superfamily 1/2, ATP-binding domain	PS51192	IPR014001 [Display all genes with this domain]
Pfam	794	908	Helicase, C-terminal	PF00271	IPR001650 [Display all genes with this domain]
PROSITE profiles	794	950	Helicase, C-terminal	PS51194	IPR001650 [Display all genes with this domain]
SMART	825	908	Helicase, C-terminal	SM00490	IPR001650 [Display all genes with this domain]
Superfamily	351	627	P-loop containing nucleoside triphosphate hydrolase	SSF52540	IPR027417 [Display all genes with this domain]
Superfamily	497	963	P-loop containing nucleoside triphosphate hydrolase	SSF52540	IPR027417 [Display all genes with this domain]
Gene3D	759	963	P-loop containing nucleoside triphosphate hydrolase	3.40.50.300	IPR027417 [Display all genes with this domain]
Pfam	365	557	SNF2, N-terminal	PF00176	IPR000330 [Display all genes with this domain]
Gene3D	336	651	SNF2-like, N-terminal domain superfamily	3.40.50.10810	IPR038718 [Display all genes with this domain]
PANTHER	104	963	SNF2/RAD54 Helicase and Transcription Factor	PTHR45626	IPR050628 [Display all genes with this domain]
Pfam	716	755	Zinc finger, C3HC4 RING-type	PF00097	IPR018957 [Display all genes with this domain]
SMART	716	755	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	716	756	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
PROSITE patterns	731	740	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	699	758	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
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End

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Feature type	Start	End
MobiDBLite	1	28
MobiDBLite	1	167
MobiDBLite	95	119
MobiDBLite	120	142
MobiDBLite	181	332
MobiDBLite	190	219
MobiDBLite	263	292
MobiDBLite	318	332
Seg	81	93
Seg	161	173
Seg	196	215
Seg	228	246
Seg	263	288
Seg	302	314
Alphafold	1	965

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