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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EGR52231 TRIREDRAFT_43817-1

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Description

predicted protein

Location

SuperContig GL985056: 815,324-817,662 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 31 domains and features.

Gene

This transcript is a product of gene TRIREDRAFT_43817 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
TRIREDRAFT_43817-1	EGR52231	2216	641aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G0R7D0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	5	82	-	SSF57850	-
CDD	126	168	-	cd15545	-
PANTHER	298	635	PHD and RING finger domain-containing protein 1-like	PTHR12618	IPR047157 [Display all genes with this domain]
Superfamily	109	170	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	123	171	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
Pfam	126	168	Zinc finger, PHD-finger	PF00628	IPR019787 [Display all genes with this domain]
SMART	125	169	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	126	168	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
SMART	7	74	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	7	75	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
Pfam	50	75	Zinc finger, RING-type	PF13639	IPR001841 [Display all genes with this domain]
SMART	126	168	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
Gene3D	1	87	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]
Gene3D	103	180	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	292	409
MobiDBLite	303	333
MobiDBLite	384	409
MobiDBLite	442	479
MobiDBLite	445	459
MobiDBLite	497	568
MobiDBLite	519	547
Seg	19	41
Seg	117	122
Seg	208	221
Seg	241	260
Seg	354	366
Seg	392	406
Seg	442	461
Seg	526	541
Alphafold	1	641
Alphafold	1	641

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