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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EGR47960 TRIREDRAFT_22528-1

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Description

hypothetical protein

Location

SuperContig GL985066: 786,999-789,164 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 24 domains and features.

Gene

This transcript is a product of gene TRIREDRAFT_22528 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
TRIREDRAFT_22528-1	EGR47960	1990	594aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G0RL74	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	182	450	-	PTHR21319	-
Superfamily	344	395	-	SSF57850	-
CDD	345	388	-	cd16464	-
Gene3D	416	458	-	2.20.28.10	-
Pfam	392	449	RCHY1, zinc-ribbon	PF14599	IPR039512 [Display all genes with this domain]
PROSITE profiles	210	277	Zinc finger, CHY-type	PS51266	IPR008913 [Display all genes with this domain]
Pfam	217	282	Zinc finger, CHY-type	PF05495	IPR008913 [Display all genes with this domain]
Superfamily	213	277	Zinc finger, CHY-type superfamily	SSF161219	IPR037274 [Display all genes with this domain]
PROSITE profiles	279	345	Zinc finger, CTCHY-type	PS51270	IPR017921 [Display all genes with this domain]
Superfamily	280	339	Zinc finger, CTCHY-type superfamily	SSF161245	IPR037275 [Display all genes with this domain]
Pfam	345	388	Zinc finger, RING-type	PF13639	IPR001841 [Display all genes with this domain]
SMART	346	387	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE profiles	346	388	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
Gene3D	338	396	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	28	73
MobiDBLite	466	512
MobiDBLite	485	500
MobiDBLite	538	587
MobiDBLite	538	594
Seg	78	93
Seg	193	207
Seg	554	587
Alphafold	1	594
Alphafold	1	594

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