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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
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- General identifiers
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Transcript: CBQ67722 sr11672-1

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Description

conserved hypothetical protein

Location

Chromosome 1: 890,685-892,592 forward strand.

About this transcript

This transcript has 1 exon and is annotated with 27 domains and features.

Gene

This transcript is a product of gene sr11672 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
sr11672-1	CBQ67722	1908	635aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E6ZK69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	82	-	3.10.20.90	-
PANTHER	4	562	-	PTHR15439	-
Gene3D	224	275	-	4.10.60.10	-
Superfamily	321	393	-	SSF57850	-
CDD	323	369	-	cd16620	-
Pfam	6	79	DWNN domain	PF08783	IPR014891 [Display all genes with this domain]
PROSITE profiles	6	79	DWNN domain	PS51282	IPR014891 [Display all genes with this domain]
SMART	6	79	DWNN domain	SM01180	IPR014891 [Display all genes with this domain]
SMART	229	245	Zinc finger, CCHC-type	SM00343	IPR001878 [Display all genes with this domain]
PROSITE profiles	230	244	Zinc finger, CCHC-type	PS50158	IPR001878 [Display all genes with this domain]
Superfamily	219	248	Zinc finger, CCHC-type superfamily	SSF57756	IPR036875 [Display all genes with this domain]
Gene3D	316	403	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]
Pfam	227	245	Zinc knuckle CX2CX3GHX4C	PF13696	IPR025829 [Display all genes with this domain]

Other features

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Feature type
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End

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Feature type	Start	End
MobiDBLite	106	159
MobiDBLite	181	218
MobiDBLite	185	203
MobiDBLite	397	423
MobiDBLite	397	481
MobiDBLite	447	478
MobiDBLite	605	635
MobiDBLite	613	635
Seg	136	166
Seg	395	412
Seg	464	483
Seg	492	563
Alphafold	1	635
Ncoils	388	415

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