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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: EDN98315 SS1G_13173/EDN98315

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Description

hypothetical protein

Location

SuperContig CH476643: 632,932-635,356 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 28 domains and features.

Gene

This transcript is a product of gene SS1G_13173 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
SS1G_13173/EDN98315	EDN98315	1944	647aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7F6E4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PROSITE profiles	361	398	-	PS50294	-
PANTHER	19	604	DDB1- and CUL4-associated factor	PTHR19847	IPR051859 [Display all genes with this domain]
SMART	207	246	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	313	351	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	324	351	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
SMART	354	395	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	356	395	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	361	404	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
SMART	458	503	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	461	503	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	484	505	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
PROSITE patterns	382	396	WD40 repeat, conserved site	PS00678	IPR019775 [Display all genes with this domain]
Superfamily	213	572	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	200	430	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]
Gene3D	447	523	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	1	60
MobiDBLite	25	60
MobiDBLite	150	166
MobiDBLite	150	173
MobiDBLite	605	632
MobiDBLite	605	647
MobiDBLite	633	647
Seg	31	63
Seg	67	77
Seg	172	184
Seg	529	538
Seg	632	646
Alphafold	1	647

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